Transcript Information: S_Transcript_43600.p1


Annotated TAIR IDAT1G78770.1
Annotated Gene Nameanaphase promoting complex 6
Annotated Gene Symbol(s)APC6
Annotation TypeOrtholog
Chromosome Positionchr1:29617421-29621273 | Forward length=543
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6863497142753
Replicate 29.165791249997
Replicate 310.035018163136
Condition 2: 8 Hour
Replicate 111.681923372253
Replicate 212.91316263396
Replicate 311.324044040146
Condition 3: 24 Hour
Replicate 18.9949520255388
Replicate 29.4154805445855
Replicate 39.0873542341962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43600.p1 GENE.S_Transcript_43600~~S_Transcript_43600.p1 ORF type:complete len:544 (+),score=80.61,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|50,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.0001,TPR_1|PF00515.24|1.7e-06,TPR_1|PF00515.24|3.1e-07,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|5.7e+02,TPR_2|PF07719.13|0.0006,TPR_2|PF07719.13|0.96,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|0.59,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|9.9e-05,TPR_2|PF07719.13|0.00042,TPR_2|PF07719.13|0.003,ANAPC3|PF12895.3|2.8e-18,ANAPC3|PF12895.3|4.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|6e+02,ANAPC3|PF12895.3|0.0016,ANAPC3|PF12895.3|8.1e-05,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.037,TPR_11|PF13414.2|3.6e-12,TPR_11|PF13414.2|3.2e-08,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|0.0082,TPR_8|PF13181.2|5.5e+03,TPR_8|PF13181.2|25,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.22,TPR_8|PF13181.2|1.7e-05,TPR_8|PF13181.2|0.012,TPR_12|PF13424.2|4.5e+02,TPR_12|PF13424.2|49,TPR_12|PF13424.2|4.9e+02,TPR_12|PF13424.2|0.073,TPR_12|PF13424.2|81,TPR_12|PF13424.2|0.00028,TPR_12|PF13424.2|1.4e-10,TPR_7|PF13176.2|4.7,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|7.2e-05,TPR_7|PF13176.2|0.0071,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|0.75,TPR_16|PF13432.2|2.4e+02,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.0014,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|10,TPR_14|PF13428.2|5,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1,TPR_14|PF13428.2|1.1e+02,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|2.3e+03,TPR_10|PF13374.2|9.5e+03,TPR_10|PF13374.2|0.0056,TPR_10|PF13374.2|0.46,TPR_10|PF13374.2|0.2,TPR_19|PF14559.2|1.4,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|0.63 S_Transcript_43600:218-1849(+)
ATGAGGGAAGAAGAGATAGAGAAGTTGAGGGGGGTGGTGAGAGACTGTGTGAGCAAACACTTATACTCATCAGCCATTTTTTTTGCTGATAAAGTTGCGGCTTTCACAGGTGACCCAGCCGATATTTATATGCAGGCACAAGCCCTGTTTCTTGGCCGTCACTTTCGTCGTGCCTTTCATCTCCTCAATGCTTCTCAGATTGTTCTCCGTGACCTCCGTTTTCGCTATCTCGCCGCTAAATGCCTGGAGGAGTTAAAAGAGTGGGATCAGTGTTTACAAATGTTGGGAGATGCTAAAGTGGATGAACATGGTAATGTTAGCGACTCAAAAGATGTCAACATTATGTACCTAGATAAGGAAGGGGAAGATCGAGAAATCAATATATCTGCAGCGATTTGTTTTCTCAGGGGCAGGGCATATGAGGCATTGGAAAATCGTGTCCAGGCACGTCAATGGTACAAAGCTGCTATCAAAGCTGATCCTCTATGTTATGAGGCTCTGGAGCATCTCATTGAGAATCACATGCTTACATGTGAGGAAGAATCGTCTCTACTGTCGTCACTCCACTTTTCTCGTGAAGACAACTGGCTTTCTTCGTTTTACTCTTGTTTGATAAAGAAGCATGAGAAAGATAATGTAGTTGAAGCCAAATTTAAAGATCTCGAGAAAGAAAGTACAGTGACAGATTCATCATTCACGGGAACATTGAAGAATAACACAGATCTTTTGGCCTGTAAAGCTGAATACTATCATCAGTGTGGTGAATATCAGAAGTGCTTTGAACTAACTTCTCAATTGCTTGAGAAAGATCCTTTCCATCTGAAATGTACTTTGGTACATCTAGCTGCTGCCATGGAGCTTGGCCAGTCAAATGAGCTTTATATTATGGCTTGCAATTTGGTCAAGGATTACCCTCAAAGGGCCCTGTCATGGTTTGCTGTAGGGTGCTACTATTATTGCATCAAGAAGTATGACCAATCACGTCGATATTTTAGCAAGGCTACAAATCTAGAAGGAACATTTTTAGCGGCTTGGATGGGTCAGGGGAATGCATTTGCAGCATTAGAAGAAGGTGACCAGGCAATGTTGTCTTATCGCACTGCTGCCCGTCTGTTTCCTGGGTGTCATTTGCCAACCTTGTATATCGGCATGGAATACATGCGAACACACAGCTTCAAACTTGCAGAGCAGTTTTTCATGCAGGCGAAGACAAGTTGCTCTTCTGATCCACTAGTGTATAATGAACTGGGAGTTGTTGCATATCACATGAAGGAGTACAAAAAGGCAGTTCGATGGTTTGAGAAAACATTGGCAATCATCCCAACGTCTATCAATGAAACGTGGGAATGCACTGTTGTCAATCTCGCTCATGCATTTAGAAAACTAAAGATGTACCGTGAAGCCATCACATACTATGAGAAAGCACTTACCTTATCAACCAGGAGTTTAAGCACTTATGCAGGCCTTGGATACACTTACCATTTACAGGGCAATTATAGTGCTGCAATTGCAAACTATCACAAGGCACTATGGCTGAAACCTGATGATCAGTTCTGCACAGAGATGTTAACTTCGGCACTAGCAGAGGAGAGTCGTTGTGATATCGACTCTATTCCAGGATTATTATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43600.p1 GENE.S_Transcript_43600~~S_Transcript_43600.p1 ORF type:complete len:544 (+),score=80.61,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|50,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.0001,TPR_1|PF00515.24|1.7e-06,TPR_1|PF00515.24|3.1e-07,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|5.7e+02,TPR_2|PF07719.13|0.0006,TPR_2|PF07719.13|0.96,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|0.59,TPR_2|PF07719.13|8.4e+02,TPR_2|PF07719.13|9.9e-05,TPR_2|PF07719.13|0.00042,TPR_2|PF07719.13|0.003,ANAPC3|PF12895.3|2.8e-18,ANAPC3|PF12895.3|4.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|6e+02,ANAPC3|PF12895.3|0.0016,ANAPC3|PF12895.3|8.1e-05,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|0.0018,TPR_11|PF13414.2|0.037,TPR_11|PF13414.2|3.6e-12,TPR_11|PF13414.2|3.2e-08,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|0.0082,TPR_8|PF13181.2|5.5e+03,TPR_8|PF13181.2|25,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|17,TPR_8|PF13181.2|0.22,TPR_8|PF13181.2|1.7e-05,TPR_8|PF13181.2|0.012,TPR_12|PF13424.2|4.5e+02,TPR_12|PF13424.2|49,TPR_12|PF13424.2|4.9e+02,TPR_12|PF13424.2|0.073,TPR_12|PF13424.2|81,TPR_12|PF13424.2|0.00028,TPR_12|PF13424.2|1.4e-10,TPR_7|PF13176.2|4.7,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|1.2e+04,TPR_7|PF13176.2|7.9,TPR_7|PF13176.2|7.2e-05,TPR_7|PF13176.2|0.0071,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|0.75,TPR_16|PF13432.2|2.4e+02,TPR_16|PF13432.2|0.77,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.0014,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|10,TPR_14|PF13428.2|5,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|1,TPR_14|PF13428.2|1.1e+02,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.7e+03,TPR_10|PF13374.2|2.3e+03,TPR_10|PF13374.2|9.5e+03,TPR_10|PF13374.2|0.0056,TPR_10|PF13374.2|0.46,TPR_10|PF13374.2|0.2,TPR_19|PF14559.2|1.4,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|0.63 S_Transcript_43600:218-1849(+)
MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTGDPADIYMQAQALFLGRHFRRAFHLLNASQIVLRDLRFRYLAAKCLEELKEWDQCLQMLGDAKVDEHGNVSDSKDVNIMYLDKEGEDREINISAAICFLRGRAYEALENRVQARQWYKAAIKADPLCYEALEHLIENHMLTCEEESSLLSSLHFSREDNWLSSFYSCLIKKHEKDNVVEAKFKDLEKESTVTDSSFTGTLKNNTDLLACKAEYYHQCGEYQKCFELTSQLLEKDPFHLKCTLVHLAAAMELGQSNELYIMACNLVKDYPQRALSWFAVGCYYYCIKKYDQSRRYFSKATNLEGTFLAAWMGQGNAFAALEEGDQAMLSYRTAARLFPGCHLPTLYIGMEYMRTHSFKLAEQFFMQAKTSCSSDPLVYNELGVVAYHMKEYKKAVRWFEKTLAIIPTSINETWECTVVNLAHAFRKLKMYREAITYYEKALTLSTRSLSTYAGLGYTYHLQGNYSAAIANYHKALWLKPDDQFCTEMLTSALAEESRCDIDSIPGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST