Transcript Information: S_Transcript_43651.p1


Annotated TAIR IDAT5G52430.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21283093-21285045 | Reverse length=438
E-Value7.6E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.349500480348
Replicate 211.080423199996
Replicate 39.7951420532901
Condition 2: 8 Hour
Replicate 110.947033696128
Replicate 211.683076511857
Replicate 310.847398003424
Condition 3: 24 Hour
Replicate 112.767120795614
Replicate 29.9720770935928
Replicate 310.256964724747


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43651.p1 GENE.S_Transcript_43651~~S_Transcript_43651.p1 ORF type:complete len:450 (+),score=90.54 S_Transcript_43651:489-1838(+)
ATGAGTAGGAGAGGGAATGGGGAAATGAGAAGTGTAAGTGCTATGGACACCATCAACGCTGCTGCTACTGCTATTGCCTCAGCTGAGTCCAGGGTCCCACCTCCTACTGTTCAGAAGCGAAGATGGAGCAGCTGTTGGAGCATATATTGGTGCTTTGGATCTCAGAAAAACAGTAAACGCATTGGCCATGCTGTTCTTGTTCCCGAGCCAACAACCACAGGAAATGGAACCGCTGCTCCCCAATCTGAAAATGTGACTCAAGCACCTACCATCAGGATCCCATTTGTTGCTCCTCCCTCATCTCCTGCATCATTTCTGCCGTCAGAACCTCCTTCAGCTATACAGTCCCCTGCAGGCTCAGTGGGTTTTAACTCTGTCTCTGCAAATATGTACTCCCCAGGTGGTCCTCGCTCCATTTTTGCGATTGGTCCATATGCCCATGAGACCCAGTTAGTCACTCCTCCGGTATTTTCAACATATACAACTGAACCTTCTACTGCCCCATTTACTCCACCCCCCGAATCAGTACACTTGACAACACCCTCCTCACCTGAGGTGCCATTTGCCCAGCTTTTCGACCCCATTCATCGTAACGGTGATACTGGTTCTAGATTCCCCTCTTCTCACTATGATTTCCAATCATACTTGCTCCATCCTGGAAGTCCTGTGGGGCCTCTTATTTCACCTGGTTCGGCTGTCTCTGGTTCGGGCACATCCTCACCCTTTCCTGACCGTGACTTTCCTGGTGGTCTCCCCTACTTCCCTGACATTCGCTATGGGGTTCCTCCAAAGCTCCTAACCCTTGAAACGGGGGGTAGCCGTGAATGGGGATCACAACAAGCATCCGGTTCAGTGACCCCAGATGCTGTCCAGCCCAAGTCTCGTGATGGTGTCCTTTTGGGTCGCCAAGATTCTGTAATTTCACCGCTTCCAAACTTGGTCAACGGCCACCGCAACAACGATGTCCTCATTGATCACAGAGTCTCCTTCGAGCTAACAGCCGAGGATGTGGTCAGATGTGTGGAAAAGAAACCAACCTCATTACCTAAAGCACTGCAGAACTCTGATGAAAGAAATGAGAATACAAGCTCCGTTGATGAAAGTGCTACTGCTGGAACATCCGAGAGAGGTTTGGCAAATGGGGAGGATGGGCAGCGGCACCACAAGCAGCGAGCTGCCTCCCTAGGGTCAATAAAGGAATTCAATTTTGACCATGTAAACCGGGTAGATTCGGATGATAAACGTTTCATCAGCTCCAACTGGTGGGCTAATGAGAAGGTTGAAGGGAACGAAGAAGCGGCATGCAAGAACTGGACCTTCTTTCCTATGATTCAGCCAGGAGTTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43651.p1 GENE.S_Transcript_43651~~S_Transcript_43651.p1 ORF type:complete len:450 (+),score=90.54 S_Transcript_43651:489-1838(+)
MSRRGNGEMRSVSAMDTINAAATAIASAESRVPPPTVQKRRWSSCWSIYWCFGSQKNSKRIGHAVLVPEPTTTGNGTAAPQSENVTQAPTIRIPFVAPPSSPASFLPSEPPSAIQSPAGSVGFNSVSANMYSPGGPRSIFAIGPYAHETQLVTPPVFSTYTTEPSTAPFTPPPESVHLTTPSSPEVPFAQLFDPIHRNGDTGSRFPSSHYDFQSYLLHPGSPVGPLISPGSAVSGSGTSSPFPDRDFPGGLPYFPDIRYGVPPKLLTLETGGSREWGSQQASGSVTPDAVQPKSRDGVLLGRQDSVISPLPNLVNGHRNNDVLIDHRVSFELTAEDVVRCVEKKPTSLPKALQNSDERNENTSSVDESATAGTSERGLANGEDGQRHHKQRAASLGSIKEFNFDHVNRVDSDDKRFISSNWWANEKVEGNEEAACKNWTFFPMIQPGVS*

Click here to download the sequence:
Link to NCBI Protein BLAST