Transcript Information: S_Transcript_436696.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81468371128104
Replicate 20.78795676991124
Replicate 30.37638236905307
Condition 2: 8 Hour
Replicate 10.21760602364421
Replicate 20.68485250937939
Replicate 31.1962975696673
Condition 3: 24 Hour
Replicate 10.33436046159073
Replicate 20.57815845858029
Replicate 30.2573678000522


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_436696.p1 GENE.S_Transcript_436696~~S_Transcript_436696.p1 ORF type:complete len:196 (+),score=25.89,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|1e+04,zf-RVT|PF13966.2|1.8e-16 S_Transcript_436696:3818-4405(+)
ATGGCATGGCACAAATTTTTCCAAGAGAAGAAATATGGGGGTGTTAATATTAAGGAAGTGCTAAACTGGAATAAATCCCTGTTAGTCAAATGGATCCTTAAAGTCCATAACAGGACTAACACACTCTGGGTGAATTGGGTGAATGTTTATTATCTAAGAGGCAATAGCATATGGGATGTCAAGGCAAATCAAGGTGATTCATGGGATTCATGGGCCTGGAAATCTCTATTGAGATGTAGGGATGATCTTCCATCCATTGTTGGAGGAATAAATGCAATTATTCAAGTGACACAACAGCAGAAGCAGGGGGAATCTATTACTTCAAGGGTCTATCAGATCTTCAAAGGGCATTCTGTGCAGGCCCTTTGGGTTAATACAGTGTGGGATGCCATTAATATTCCAAAGCATGTCATTATAACAGTGCTAGCTATTCATAATGCATTACCAACAATTGATAACATCACAAGAAGAGGTCTACAGCTAGTTAACTGGTGTATCTTATGCAAGCAACAACAGGAAACCAGAGATCATCTATTCTTTGGATGCAACTTCACTGATGCATTTAATTGGCAGCAGATTTTGCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_436696.p1 GENE.S_Transcript_436696~~S_Transcript_436696.p1 ORF type:complete len:196 (+),score=25.89,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|1e+04,zf-RVT|PF13966.2|1.8e-16 S_Transcript_436696:3818-4405(+)
MAWHKFFQEKKYGGVNIKEVLNWNKSLLVKWILKVHNRTNTLWVNWVNVYYLRGNSIWDVKANQGDSWDSWAWKSLLRCRDDLPSIVGGINAIIQVTQQQKQGESITSRVYQIFKGHSVQALWVNTVWDAINIPKHVIITVLAIHNALPTIDNITRRGLQLVNWCILCKQQQETRDHLFFGCNFTDAFNWQQILL*

Click here to download the sequence:
Link to NCBI Protein BLAST