Transcript Information: S_Transcript_436930.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3285555708047
Replicate 20.54476023598802
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10.92146748283908
Replicate 20.27619566221885
Replicate 30.13157930620359
Condition 3: 24 Hour
Replicate 10.40453487945545
Replicate 20
Replicate 30.93414979278208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_436930.p2 GENE.S_Transcript_436930~~S_Transcript_436930.p2 ORF type:3prime_partial len:162 (+),score=8.89,RVT_1|PF00078.23|8e-22 S_Transcript_436930:2054-2536(+)
ATGGCAATCAAATTGGACATGGAAAAGGCATATGATAGGATTGAATGGGACTTCCTATTCTCGTGCCTACATAGTCTGGGTTTTGCAGAAAAGTGGATTTCCTGGGTTCATTCATGTGTCACATCGGTCAGTTATTCTCTGCTTATTAATGGGGAAGCCCAAACACCTTTTGCCCCGTCCAGGGGACTTCGGCAAGGAGACCCTCTTTCTCCTTACCTATTTATCCTCTGTATGAATATCCTTATTCAACGTATAGCTTTGGCTAGTTCTTCCCCCAAGTGCGGCATTGGTATGAAACCGGCAAGAGGTGGCTCTTCTATTCCTTGTCTCATGTTTGCTGCTTGTGCGACTTTAAAACAAATCCTTGACCAATTTTGTGCTCAGTCGGGTCAGCTCGTGAATTTTCACAATTTTAACTCCGCCTGTGAGTGGTTAGGCCTTGGTTTGAGTACTCATTGCCGGTCCCAAGCCCGGATAAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_436930.p2 GENE.S_Transcript_436930~~S_Transcript_436930.p2 ORF type:3prime_partial len:162 (+),score=8.89,RVT_1|PF00078.23|8e-22 S_Transcript_436930:2054-2536(+)
MAIKLDMEKAYDRIEWDFLFSCLHSLGFAEKWISWVHSCVTSVSYSLLINGEAQTPFAPSRGLRQGDPLSPYLFILCMNILIQRIALASSSPKCGIGMKPARGGSSIPCLMFAACATLKQILDQFCAQSGQLVNFHNFNSACEWLGLGLSTHCRSQARIKE

Click here to download the sequence:
Link to NCBI Protein BLAST