Transcript Information: S_Transcript_43742.p1


Annotated TAIR IDAT1G28060.1
Annotated Gene NamePre-mRNA-splicing factor 3
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9779167-9782486 | Forward length=786
E-Value4.2E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.277092427344
Replicate 212.09559992212
Replicate 313.712716711571
Condition 2: 8 Hour
Replicate 115.780788834678
Replicate 213.89686597856
Replicate 313.591987531647
Condition 3: 24 Hour
Replicate 114.648921870163
Replicate 212.798387713702
Replicate 312.492330228887


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43742.p1 GENE.S_Transcript_43742~~S_Transcript_43742.p1 ORF type:5prime_partial len:850 (+),score=245.20,PRP3|PF08572.6|1.6e+04,PRP3|PF08572.6|5.4e+03,PRP3|PF08572.6|4.6e-63,DUF1115|PF06544.8|1.6e+04,DUF1115|PF06544.8|1.8e-43 S_Transcript_43742:2-2551(+)
ACCGCCCTTGTAAAAATACTGACAACCTTGATCTCTAAAAGACTAAAACTCTCTCCCCCTTTTCTGGACCTTTCGCTTGAAAACCCTAATCGTAACCAAGAAACCGCAAAACGGACATTGATTCTCATGGAGAAGGAGAATTCTAGTCGAAAATCACGAGATGAGAGAGAAACTAGAGACCACAAAGACTCTAAGCATCGCCACCACAGATCTTCCAAGGACGAGAAGCACCGCCGTAGGTACGACGACGAAGAATACGACGATGAAGACTATCATCGTTCGAGAGGTCGTTCTGACGATCGCGATTCGAGGAGAGATAAGTCGCTTGATAGGGATTCGAGGCGAGAGAAATCGATTGATAGGGATTCGAGGAAGGAGAGAGAAGGAAGCAGGGATAGGCATAAGAGGAAGGAGAGAGAGGAGAGTGAGGAAAGGTATGAGGGAGGTGGAGAGAAAAGAGTTAGGGTTTCGGATGGGAAGAGAGAGAGAAGGAGGTTTGAAGATGAGGAAGTGAAGGTGAAGAAGGCAGCTGAAAACGGTGGTCAGATTGATAATGGAAGAAGGAGAGATAGGAGAAGGTTTGAGGATAATGAGGTGAACAATTCAAGTGGTTCCCTTGCCATTGATGGTGCTGTGGGATCACTCGATTTGCCACCAAGGTCTACATCTGAAAGTATTCCAGCAAATATTCATTCTGCCACCAAGGTATCTTATATTTCTACCACCAATGAAAATAAGGGAGTTAATATTACCGGATCTCATGAGGTTACTGGAAAATCTAGTACAGATGGAACAACTTCAACTGCTGGAAAGAGTGGAAACCTATCCCTTGATGCTTTAGCGAAAGCTAAGAAATCTCTTCAAATGAACAAGGAAAGAATGGCGAATTTGTTGAAGAAAGCTCAATCGACCAAGAGCTCAACCTCTGTTGCCAGTCCACCAGTGGGTTCAAAAGAGGAAACAAAAGCCCCTCCTGCTGGTATTCTGCCAGTCCCAGCAACAACTGCCAGTATTGGTGGGGTAACAGCTAGTCCATCAGCCTTCCAGGCACTTGCCTCTGGTCCATTAGATCCTGCCAAAATTGAAGCTGTGAAACGTGCCCAGGAACTTGCTGCCAGGATGGGGTTCCACCAGGATCCTGAATTTGCTCCCCTGTTAAACTGCTTTCCTGGACAGATACCTCCAGATGTTGCGGTGCTGCAAAAGCCTGCAAAGGCCCCTGTTCTCCGTTTAGATGCTCTGGGAAGGGAAATCGATGAGCATGGGAATGTTGTAAATATATCTAAACCTAGTAGTCTCAGCACCCTTAAGGTGAACATTAACAAGCAAAAGAAAGATGCTTTCCAAATTCACAAACCAGAACTGGAAGTTGACCCTGAAAAGAATCCTCATTTTGACCCCAGGATGGGTATAAACAAAAACAAAATTCTTAGGCCCAAAAGAATGACTTTCCAGTTTGTTGAGGAAGGTAGATGGGCAAAGGAAGCTGAAGTTATCAAATTGAAGAACCAATTTGGGGAAGCCCAAGCAAAGGAGCTGAAGGCTAAGCAGGCACAGCTTGCTAAGGCAAAGGCTGAGCCTAACATTAATCCAAATTTGATTGAAGTTTCAGAAAGAGTTGTCACCAAAGAAAAGCAGAAGGAACCAATCCCAGAAGTTGAATGGTGGGATGTGCCTCTTCTACGTCCTGGAAACTATGGGGATATTGCTGATGGTGGCACTTTTGAAGACATAGTTAAGATAGAGAAGCTCACTATATATATAGAGCATCCTCGTCCTATAGAGCCTCCGGCTGAGCCTGCTCCACCACCACCCCAACCCCTTAAGCTTACCAAGAAGGAGCAGAAGAAACTTCGCACACAGCGACGCCTGGCTAAAGAGAAGGAAAGGCAAGAGATGATTAGACAAGGTTTGATTGAGCCCCCCAAGCCCAAAGTTAAAATGAGTAATCTCATGAGAGTCTTGGGCTCTGAAGCAACCCAAGACCCCACCAAGTTGGAGATGGAAATTCGAGCTGCTGCAGCAGAGCGTGAGCAGGCTCATGTGGACCGGAACATTGCTCGCAAACTCACACCAGCTGAGCGTCGTGAAAAGAAGGAAAGGAAGCTCTTTGATGATCCTAATACCGTCGAGACCATTGTTTCTGTTTACAAGATCAATGATCTCTCACACCCAAAAAACCGTTTTAAGGTTGACGTTAATGCGCAGGAGAACCGTTTGACTGGTTGTGCTGTCATTTCAGAGGGTTTCAGTGTTGTGGTCGTTGAAGGTGGAAGCAAGTCCATTAAGAGGTATGGTAAACTGATGCTTCGACGCATAAACTGGTCTGAGAAACCGGAAAACGAGGATGAGGAAGATGATGAAGATGACGATGAAAAACCACCCAACAAATGTGCTTTGGTTTGGCAAGGAAGTGTGGCCAGACCGAGCTTTCACAAGTTTCTAGTCCATGAGTGCAGAACCGAGGCTGCAGCACGCAAAGTCTTCTTTGATGCTGGTGTTGGTCACTACTGGGAGCTTGCTGCTAACTTTTCAGAGGATCAGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43742.p1 GENE.S_Transcript_43742~~S_Transcript_43742.p1 ORF type:5prime_partial len:850 (+),score=245.20,PRP3|PF08572.6|1.6e+04,PRP3|PF08572.6|5.4e+03,PRP3|PF08572.6|4.6e-63,DUF1115|PF06544.8|1.6e+04,DUF1115|PF06544.8|1.8e-43 S_Transcript_43742:2-2551(+)
TALVKILTTLISKRLKLSPPFLDLSLENPNRNQETAKRTLILMEKENSSRKSRDERETRDHKDSKHRHHRSSKDEKHRRRYDDEEYDDEDYHRSRGRSDDRDSRRDKSLDRDSRREKSIDRDSRKEREGSRDRHKRKEREESEERYEGGGEKRVRVSDGKRERRRFEDEEVKVKKAAENGGQIDNGRRRDRRRFEDNEVNNSSGSLAIDGAVGSLDLPPRSTSESIPANIHSATKVSYISTTNENKGVNITGSHEVTGKSSTDGTTSTAGKSGNLSLDALAKAKKSLQMNKERMANLLKKAQSTKSSTSVASPPVGSKEETKAPPAGILPVPATTASIGGVTASPSAFQALASGPLDPAKIEAVKRAQELAARMGFHQDPEFAPLLNCFPGQIPPDVAVLQKPAKAPVLRLDALGREIDEHGNVVNISKPSSLSTLKVNINKQKKDAFQIHKPELEVDPEKNPHFDPRMGINKNKILRPKRMTFQFVEEGRWAKEAEVIKLKNQFGEAQAKELKAKQAQLAKAKAEPNINPNLIEVSERVVTKEKQKEPIPEVEWWDVPLLRPGNYGDIADGGTFEDIVKIEKLTIYIEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKERQEMIRQGLIEPPKPKVKMSNLMRVLGSEATQDPTKLEMEIRAAAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNTVETIVSVYKINDLSHPKNRFKVDVNAQENRLTGCAVISEGFSVVVVEGGSKSIKRYGKLMLRRINWSEKPENEDEEDDEDDDEKPPNKCALVWQGSVARPSFHKFLVHECRTEAAARKVFFDAGVGHYWELAANFSEDQI*

Click here to download the sequence:
Link to NCBI Protein BLAST