Transcript Information: S_Transcript_43745.p1


Annotated TAIR IDAT5G66750.1
Annotated Gene Namechromatin remodeling 1
Annotated Gene Symbol(s)DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
Annotation TypeOrtholog
Chromosome Positionchr5:26649050-26652869 | Forward length=764
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.727957112478
Replicate 210.11574540977
Replicate 38.3344643961462
Condition 2: 8 Hour
Replicate 19.1876187532312
Replicate 28.7247262152293
Replicate 312.525517828487
Condition 3: 24 Hour
Replicate 12.6190835278578
Replicate 25.3449568803244
Replicate 36.4799718827373


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43745.p1 GENE.S_Transcript_43745~~S_Transcript_43745.p1 ORF type:complete len:759 (+),score=194.57,SNF2_N|PF00176.19|6e+02,SNF2_N|PF00176.19|2.5e-61,Helicase_C|PF00271.27|1.8e-20,HDA2-3|PF11496.4|2.9e-07,ResIII|PF04851.11|2.3e+03,ResIII|PF04851.11|7.3e-07,ResIII|PF04851.11|4.8e+03 S_Transcript_43745:171-2447(+)
ATGGCAGAAGAGAACGGGACTAAAGCTGATCCTTCCATTGACTCTCCTACTTCCGTTCTTGAAGAAGAGGACACTGTTAAAGAGGTGGCCGAGATCAAGTCAGAGGATGATATACTTGGTGATGCCAAAAATGGAGATTCTACTCTTATCTCAGAAGGAATGGCGGAAGAAGAGAAGAAGTTGCTTGAAGCTAGAGTGAAGGAAGAAGATGCAGAGAAGGAGAAGGTTCCAGAGGATGCAGCCCATTTGAACGACGTTCAGTTCTCTAAACTGGATGAGCTCTTAACACAAACTCAACTCTATTCGGAGTTCCTGTTGGAAAAGATGGATGACATTACACTGAATGGAGCGGAGGAGGAACAGCAAGAAGAATCCAGTAAGGAGACAAAAAAAGGACGGGGTAGAAAAAGAAAAGCACAGTATGATGATAGGAAAGCAAAGAGAGCAGTTGCAGCAATGCTGACCAGATCTCGTGAGGGCACAGCCGCTGAAGATGCTGACTTAACCGAGGAGGAAAGAGTTGCAAAGGAGCAATCTGAATTGATACCTCTCTTGACCGGTGGGAAGTTAAAATCGTATCAGCTAAAAGGAATTAAGTGGCTGATTTCTCTGTGGCAGAATGGTCTTAATGGAATCCTTGCTGATCAAATGGGACTTGGCAAGACTATTCAGACCATAGGGTTTTTGGCTCATCTAAAAGGAAAGGGGTTGGATGGGCCTTACATGGTCATTGCTCCACTGTCTACTCTCTCAAATTGGATGAATGAAATGGCTAGGTTTACTCCATCAGTGAAAGCAATTATTTATCACGGGGACAGGAAAGAGAGAAATGAGATAAGGCTGAAACATATGCCAAAGACTATTGGTCCAAAGTTTCCAATCATTATTACATCTTATGAGGTTGCTCTTAATGATGCCAGGAGATATTTGAGGCATTACAAGTGGAAATATGTGGTGGTTGATGAGGGTCACCGTCTGAAAAATTCAAAGTGCAAATTGTTCAAAGAGTTGAAGCTTTTGCCCATTGAAAACAAGCTTCTGTTGACTGGGACACCGCTGCAGAATAACTTGGCAGAATTGTGGTCATTGTTGAATTTCATTTTGCCCGACATATTCTCCTCTCATGAGGAATTTGAATCCTGGTTTGATCTGTCTGGAAAGTGTGTTAGTGAGGATGTGAAGGAGGAGATGGAGGAAAAAAGGCGGATTCAAGTAGTGGCCAAGCTCCATGCTATACTGCGCCCATTCCTCCTGCGGAGAATGAAGGCAGATGTTGAACAGATGCTGCCTCGCAAAAAGGAGATCATTTTATATGCAACTATGACTGAGCATCAAAGGAACTTTCAGGATCACCTAATCAATAAAACTTTGGAAAATCATCTGCTGGATACTGTTAGTTGTGGTGGCCGTGCAACACATGGAATGAAAGGAAAGCTAAACAATTTAATGATTCAACTGCGCAAAAACTGCAATCATCCAGATTTACTGGAGTCTGCTTTTGATGGATCATTCTTCTATCCACCCGTGGAACAAATAGTCGGACAGTGTGGTAAATTCCGTTTGCTAGATAGGTTGTTGACTCAACTTCTGGACCGGAAACATAAAGTTCTGATATTCTCTCAGTGGACCAAAATTCTGGACATAATGGATTATTACTTTAGTGAGAAAGGTTTTGAAGTTTGCAGAATTGATGGCAGTGTGAAACTTGATGAAAGGAGGAGACAGATAAATGAGTTTAATGATGTAAACAGCAACTATAGAATTTTTCTTCTGAGCACAAGGGCGGGAGGCTTGGGCATAAACCTTACTTCTGCTGACACCTGTATATTATATGACAGTGACTGGAATCCCCAAATGGATCTGCAGGCTATGGATCGCTGTCATAGGATTGGACAAACTAAGCCTGTTCATGTTTATAGGCTTGCCACTGCACAATCTATTGAGGGCCGTATTCTGAAAAGAGCCTTTAGTAAGCTGAAGCTTGAACATGTTGTCATTGGCAAAGGGCAATTTAAACAAGAGAGGACTAAGAATGATGATATGGAGGAAGAAGATCTGCTGGCACTGCTCCATGAGGAAGAGGATGCAGAAGATAAGATGATCCAGACAGACATCAGTGATGAGGATCTCGAGAAAATCATGGACCGTAGTGATTTGATTGGCACTGTAGATGATGATGAAAATTCTGAGAAATTTGTGCTTCCACTTAAAGGGCCTGGCTGGGAGGTGGTCGTGCCTAATGCAAGTGGAGGAGTGTTGTCCACCTTGAACAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43745.p1 GENE.S_Transcript_43745~~S_Transcript_43745.p1 ORF type:complete len:759 (+),score=194.57,SNF2_N|PF00176.19|6e+02,SNF2_N|PF00176.19|2.5e-61,Helicase_C|PF00271.27|1.8e-20,HDA2-3|PF11496.4|2.9e-07,ResIII|PF04851.11|2.3e+03,ResIII|PF04851.11|7.3e-07,ResIII|PF04851.11|4.8e+03 S_Transcript_43745:171-2447(+)
MAEENGTKADPSIDSPTSVLEEEDTVKEVAEIKSEDDILGDAKNGDSTLISEGMAEEEKKLLEARVKEEDAEKEKVPEDAAHLNDVQFSKLDELLTQTQLYSEFLLEKMDDITLNGAEEEQQEESSKETKKGRGRKRKAQYDDRKAKRAVAAMLTRSREGTAAEDADLTEEERVAKEQSELIPLLTGGKLKSYQLKGIKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYMVIAPLSTLSNWMNEMARFTPSVKAIIYHGDRKERNEIRLKHMPKTIGPKFPIIITSYEVALNDARRYLRHYKWKYVVVDEGHRLKNSKCKLFKELKLLPIENKLLLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDLSGKCVSEDVKEEMEEKRRIQVVAKLHAILRPFLLRRMKADVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLLDTVSCGGRATHGMKGKLNNLMIQLRKNCNHPDLLESAFDGSFFYPPVEQIVGQCGKFRLLDRLLTQLLDRKHKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERRRQINEFNDVNSNYRIFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIGKGQFKQERTKNDDMEEEDLLALLHEEEDAEDKMIQTDISDEDLEKIMDRSDLIGTVDDDENSEKFVLPLKGPGWEVVVPNASGGVLSTLNS*

Click here to download the sequence:
Link to NCBI Protein BLAST