Transcript Information: S_Transcript_437502.p1


Annotated TAIR IDAT3G28345.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10593921-10598775 | Reverse length=1240
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86042034068629
Replicate 20.76307392454562
Replicate 30.7210693807122
Condition 2: 8 Hour
Replicate 12.934245434613
Replicate 23.6333227866022
Replicate 33.4297679605008
Condition 3: 24 Hour
Replicate 10.7226878748768
Replicate 21.2439535677243
Replicate 31.0050889875723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_437502.p1 GENE.S_Transcript_437502~~S_Transcript_437502.p1 ORF type:complete len:1330 (+),score=249.31,ABC_membrane|PF00664.19|4.4e-45,ABC_membrane|PF00664.19|9.8e-51,ABC_tran|PF00005.23|1e-32,ABC_tran|PF00005.23|1.3e-32,SMC_N|PF02463.15|9.4e-05,SMC_N|PF02463.15|2,SMC_N|PF02463.15|0.00029,AAA_21|PF13304.2|3.5e+02,AAA_21|PF13304.2|1.6,AAA_21|PF13304.2|0.0011,AAA_29|PF13555.2|0.019,AAA_29|PF13555.2|0.00074,AAA_22|PF13401.2|0.13,AAA_22|PF13401.2|3.8e+03,AAA_22|PF13401.2|0.0025,AAA_16|PF13191.2|0.0025,AAA_16|PF13191.2|0.067,AAA_17|PF13207.2|0.073,AAA_17|PF13207.2|1.1,AAA_30|PF13604.2|0.062,AAA_30|PF13604.2|1.4 S_Transcript_437502:65-4054(+)
ATGGGGGGAAACAAACTTTTCCTCAACTATAAATACAAGCAAGTCACCTATATTTGCTCTTCAAATTCAATGCAACACAGAAAGAGTCAAAAAGACCATTTTAATTTAGTAGAGTTAAATAATTTGGAAACCAGAAAAAGAGGCAATAAAATTAAAGAAGTTTCAGTGGCTTTTCTCTCTTTAATCCCAAGAGAAATGGGAGAGAAAGACAAGAAGAAAGAAAGTGAGATGATGATGAAGAAGAAAAAGGGAGCTTCAATATGGACAATTTTCATGCATGCTGACTTTGTAGATGTGGTATTAATGGTGTTAGGCTTGATTGGTGCCATTGGTGATGGCTTGACATTGCCGTTGACATTGTTTGTGACTAGTAAGCTCATGAACAACGTTGGTTCCAGTTTTAATTTCAAAAGCCCTGATGCTTTCACTCATACCATCAATCAGAATGCAACATATCTGTGTATAGTGGCGGCAGGAGCATGGGTTGTTTCTTTCTTAGAGGGATATTGTTGGACAAGGACAGCAGAAAGGCAAGCAGCAAGTATGAGATACAGATACTTGAAAGCAGTGTTAAGGCAAGATGTAGGCTACTTTGATTTGCATGTTGCTAGCACTTCTGAAGTCATTACAAGCGTTTCCAGTGATAGCCTTACCATTCAAGATGTCATTAGTGAGAAGGTACCAAACTTTGTGATGAATACATCCACATTCATAGGGAGCTATGTGACAGCATTTCTACTGTTATGGAGGTTAGCAATAGTTGGGTTCTCATTCATACTTCTACTAATAATCCCAGGGCTAATGTACGGGCGAATGCTAATGGGATTAGCAAGGAAGCTAACAGTTGAATACAACAAGGCTGGTTACATAGCAGAGCAAGCTATATCTTCCATCAGAACAGTGTATGCTTTTGTAGGAGAAAGCAAGACAATGGCTAAATTCTCAGAAGCTCTTGAAGGGTCAGTGAAGTTGGGGCTTAAGCAAGGTTTGGCTAAAGGTGTGGCTATTGGTAGCAATGGTGTCACTTTTGCTGTTTGGGCTTTCAATTCTTGGTATGGTAGCAAACTTGTCATGTACCATGGTGCTCAAGGTGGTACTGTTTTCGTTGTTGGTGCTGCCCTTGCCGTTGGTGGATTAGCACTTGGATCTGGTATATCAAACGTGAAGTACTTCTCAGAAGCAGCTTCAGCTGGTGAACGAATCATGGAAGTGATAAAGAGGGTGCCGAAAATCGATTCCGAAAGTATGGAGGGATTGAGATTGGAGAATATATCTGGGGAGGTTGAGTTTAAGAATGTGGAATTCGCGTATCCATCAAGGCCAGAATCCTTAATTTTTCAAGAATTCTCACTGAGAATTCCTGCAGGAAGAACAGTTGCATTAGTTGGGGGAAGTGGATCAGGAAAATCCACTTCAATTGCATTGCTTCAAAGGTTTTATGATCCACTTGGTGGGGAAATACTATTGGATGGGGTGGCTATTGATAAGCTCCAACTTAAATGGTTGAGGTCACAAATGGGGTTAGTGAGCCAAGAACCTGCACTTTTTGCTACCACAATCAAGGAGAACATACTTTTTGGTAAAGAAGATGCTACTATGGAAGAGGTTGTTGAGGCTGCCAAAGCATCTAATGCTCACAATTTCATTAGCCAGTTGCCTCTTGGTTATGATACTCAGGTTGGAGAGAGGGGAGTGCAAATGTCAGGAGGACAAAAGCAAAGAATAGCAATAGCAAGAGCTATAATCAAGAAACCCCGTATTCTCCTGCTAGATGAAGCAACAAGTGCACTAGACTCTGAGTCAGAAAGGGTGGTCCAAGAAGCCCTAGACATGGCGACAATAGGTCGGACGACCATAATAATCGCACACCGTCTCTCCACCATCCGAAATGCTGACACCATCGCCATCATCCAGGATGGCCAAGTCATGGAAATGGGGTCCCACGACGAGCTCATCCATCGTCAAGACGGCCTTTACACTTCCCTTGTCCGCCTACAACAGACGGAAAAGTTCAATAACAATAACAATAATAATGCCAAGGACGACTCATCCATTTTTGGCGGGGATCAGGTCAAACGTAGTTCAAGTAATAGTAGCCGAAGGCTATCAATAATGAGCCGTTCGAGTTCAGCAAACTCATTTGAATCAACTCATGATCAAATGGGGGTTGAACTCGACACAGAATTAGGCAAGAAAAAGGCCAAAGAAGTGCCTTCTTTTAAGAGGCTATTGGCAATGAATTTACCAGAATGGAAACAAGCTAGTTTAGGGTGCTTTAGTGCCATGCTATTTGGGGCGGTCCAACCTGTCTATGCCTTTGCGATGGGGTCTATGATATCGGTTTATTTCTTGCAAGATAATGAAGAGATTAAGAGGAAGACTACCATTTATGCATCATGTTTCTTGGGGTTGGCTGTGTTTTCCTTCTTGGTCAATGTTTCCCAACATTACAATTTTGCCTACATGGGGGAATACTTGACCAAGAGAGTTAGAGAAAGGATGTTGTCTAAGATCCTCACCTTTGAAGTTGGGTGGTTTGATCAAGATGAAAATGCAACCGGTGCTGTTTGCTCTAGACTTGCCAAGGATGCCAATGTGGTGAGATCATTAGTAGGTGATCGAATGGCTTTAATTGTCCAAACCATATCTGCAGTAGTAATAGCATTCACAATGGGCCTCATCATTGCTTGGAGACTAGCAATTGTGATGATAGCAGTCCAACCACTTATCATAGTTTGTTTCTACACAAGGAGAGTTCTTCTCAAGAGTATGTCCAAAAAGGCCCTTAAGGCCCAAGATGAAAGCAGCAAGTTAGCTGCTGAAGCTGTCTCCAATCTCAGGACCATAACTGCCTTCTCATCTCAAGGTCGTATTTTAGCCATGCTTGAAAAGGCCCAACAAGGCCCAAGAAAAGAGAGCATTAGACAATCTTGGTATGCTGGGCTTGGGCTTGGCTTTTCTCAAAGTGTCAACATTTGCACTTGGGCCTTGGATTTTTGGTATGGTGGGAGGCTCATTTCACATGCTTATCTTACCTCTAAAGAATTGTTTGAGACTTTCATGATACTAGTGAGCACAGGTAGAGTTATTGCTGATGCTGGTAGCATGACTACTGATTTAGCCAAGGGGGCTGATGCTGTGGGTTCGGTTTTCGCCATACTCGACCGTGTCACGTCGATTGAGCCGGATGACGGTCGAGGGCAAAAGCCAGAGAAAATAACAGGACATATTGAGATCCGAGATGTGGACTTCACATACCCAGCCAGACCAGATATAATGATCTTTAAGAACTTCTGTATCAACATTGAGGCTGGGAAATCAACAGCTTTGGTAGGACAAAGTGGTTCGGGAAAATCAACAATTATTGGCTTGATTGAAAGGTTCTATGACCCTCTCAAGGGGGTGGTTAAAATTGACGGGCGTGACATCAAATCATACAACCTTATATGCCTAAGGAAACACATTGCTCTTGTGAGCCAAGAGCCAACATTATTTTCCGGCTCCATAAGAGAAAACATAGTCTATGGAGCCGGAGACAATGTTGATGAAGTTGAAGTCATTGAGGCCGCAAAAGCAGCCAATGCACATGATTTTATCGCGAGCCTAAAAGAAGGGTACGAGACATCGTGTGGAGACAGAGGAGTTCAGCTCTCCGGAGGGCAAAAGCAACGTATAGCAATTGCAAGGGCTATTCTTAGAAACCCAGCTATATTGTTGTTAGATGAAGCAACAAGTGCTCTTGATAGCCAATCGGAAAAAATTGTGCAAGATGCACTCGAAAGAGTGATGGTTAATAGAACAAGTGTGGTAGTGGCTCATAGGCTTAGCACTATACAAAATTGTGATCAAATTGCAGTGTTGGATAAAGGTAAAGTTGTGGAGAAAGGGACACATACATCTCTTTTGGCTAAGGGACCTAAAGGAGCTTACTATTCATTAGTGAGTCTTCAAAGAGCACCAATGCCACAAACTCCAAGTAGTGAAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_437502.p1 GENE.S_Transcript_437502~~S_Transcript_437502.p1 ORF type:complete len:1330 (+),score=249.31,ABC_membrane|PF00664.19|4.4e-45,ABC_membrane|PF00664.19|9.8e-51,ABC_tran|PF00005.23|1e-32,ABC_tran|PF00005.23|1.3e-32,SMC_N|PF02463.15|9.4e-05,SMC_N|PF02463.15|2,SMC_N|PF02463.15|0.00029,AAA_21|PF13304.2|3.5e+02,AAA_21|PF13304.2|1.6,AAA_21|PF13304.2|0.0011,AAA_29|PF13555.2|0.019,AAA_29|PF13555.2|0.00074,AAA_22|PF13401.2|0.13,AAA_22|PF13401.2|3.8e+03,AAA_22|PF13401.2|0.0025,AAA_16|PF13191.2|0.0025,AAA_16|PF13191.2|0.067,AAA_17|PF13207.2|0.073,AAA_17|PF13207.2|1.1,AAA_30|PF13604.2|0.062,AAA_30|PF13604.2|1.4 S_Transcript_437502:65-4054(+)
MGGNKLFLNYKYKQVTYICSSNSMQHRKSQKDHFNLVELNNLETRKRGNKIKEVSVAFLSLIPREMGEKDKKKESEMMMKKKKGASIWTIFMHADFVDVVLMVLGLIGAIGDGLTLPLTLFVTSKLMNNVGSSFNFKSPDAFTHTINQNATYLCIVAAGAWVVSFLEGYCWTRTAERQAASMRYRYLKAVLRQDVGYFDLHVASTSEVITSVSSDSLTIQDVISEKVPNFVMNTSTFIGSYVTAFLLLWRLAIVGFSFILLLIIPGLMYGRMLMGLARKLTVEYNKAGYIAEQAISSIRTVYAFVGESKTMAKFSEALEGSVKLGLKQGLAKGVAIGSNGVTFAVWAFNSWYGSKLVMYHGAQGGTVFVVGAALAVGGLALGSGISNVKYFSEAASAGERIMEVIKRVPKIDSESMEGLRLENISGEVEFKNVEFAYPSRPESLIFQEFSLRIPAGRTVALVGGSGSGKSTSIALLQRFYDPLGGEILLDGVAIDKLQLKWLRSQMGLVSQEPALFATTIKENILFGKEDATMEEVVEAAKASNAHNFISQLPLGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDMATIGRTTIIIAHRLSTIRNADTIAIIQDGQVMEMGSHDELIHRQDGLYTSLVRLQQTEKFNNNNNNNAKDDSSIFGGDQVKRSSSNSSRRLSIMSRSSSANSFESTHDQMGVELDTELGKKKAKEVPSFKRLLAMNLPEWKQASLGCFSAMLFGAVQPVYAFAMGSMISVYFLQDNEEIKRKTTIYASCFLGLAVFSFLVNVSQHYNFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENATGAVCSRLAKDANVVRSLVGDRMALIVQTISAVVIAFTMGLIIAWRLAIVMIAVQPLIIVCFYTRRVLLKSMSKKALKAQDESSKLAAEAVSNLRTITAFSSQGRILAMLEKAQQGPRKESIRQSWYAGLGLGFSQSVNICTWALDFWYGGRLISHAYLTSKELFETFMILVSTGRVIADAGSMTTDLAKGADAVGSVFAILDRVTSIEPDDGRGQKPEKITGHIEIRDVDFTYPARPDIMIFKNFCINIEAGKSTALVGQSGSGKSTIIGLIERFYDPLKGVVKIDGRDIKSYNLICLRKHIALVSQEPTLFSGSIRENIVYGAGDNVDEVEVIEAAKAANAHDFIASLKEGYETSCGDRGVQLSGGQKQRIAIARAILRNPAILLLDEATSALDSQSEKIVQDALERVMVNRTSVVVAHRLSTIQNCDQIAVLDKGKVVEKGTHTSLLAKGPKGAYYSLVSLQRAPMPQTPSSEN*

Click here to download the sequence:
Link to NCBI Protein BLAST