Transcript Information: S_Transcript_43783.p1


Annotated TAIR IDAT5G50230.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20448632-20450855 | Reverse length=509
E-Value5.9E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0724367738806
Replicate 29.1532512449964
Replicate 37.6874809898374
Condition 2: 8 Hour
Replicate 110.349700193051
Replicate 210.682448274155
Replicate 39.177077246763
Condition 3: 24 Hour
Replicate 110.30257714527
Replicate 29.6243583406407
Replicate 38.1934625660455


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43783.p1 GENE.S_Transcript_43783~~S_Transcript_43783.p1 ORF type:complete len:511 (+),score=103.68,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.016,WD40|PF00400.28|14,WD40|PF00400.28|0.0081,WD40|PF00400.28|0.023,WD40|PF00400.28|1.4,WD40|PF00400.28|0.0044,WD40|PF00400.28|13,ATG16|PF08614.7|4e-18,Ge1_WD40|PF16529.1|1.8e+03,Ge1_WD40|PF16529.1|5.5e-05,Ge1_WD40|PF16529.1|36,eIF2A|PF08662.7|0.00017,eIF2A|PF08662.7|1e+02 S_Transcript_43783:251-1783(+)
ATGTCAGAAGAAGAAGAGATTGGCATAGAAGCAATAAAGCAGGCAATTAAGGCTTTGAGGAAACGTCATTTGGTTGAAGAAGCTGCACATAGTCCTGCCATTACTGCCATTTCCAAACCTCTTGTTTTTCAGGGATCAGAATGGAAAGAAAAAGCCGAAAATCTGGAACTTGAACTTCAGCAGTGTTACAAAGCTCAATCTCGACTATCTGAGCAGCTTGTGGTTGAAGTTGCTGAGTGCCGAGCTGCAAAAACTTTGATTCAAGAGAAAGAAACGGCAATAGACAACCTGCAGGAAGAGGTTGCTCACCTTAGCAATGAGTGCTCGGAATTAAAAGCACTTTTAGATGAGAAGACCAAAGCTTTAGAATTGGTTACAAGTGAAAACGAAGAACTGAAGAGACAACTTGAGGAGACGACCTTGAAAGCAAAAAATGCAGAAGCTGAAAATAAAATGTTAGTCGATCGCTGGATGCTGCAGAAGATGCAAGATGCTGAGCGCATTAATGAGGCTAATGCTCTCTATGAAGACATGCTTGGTCAACTTAGGGCCAGTGGCATACAACAACTTGCTCGCCAGCAAGTTGATGGTGTGGTTCGTCAAAGTGAAGAAGGTGCGGAGTATTTTGTCGAATCAAGCATCCCCAAAACTTGCACCAACAGAATTCATGCTCATGATGGTGGTTGTGCTTCCATATTGTTCGAGTATAATTCCAACAAATTGATCAGTGGAGGGCAGGACCGTTCGATTAAGATGTGGGATACAAGTACAGGATCATTAAGCCGTACTCTCTATGGCTGCCTGGGTTCTGTTCTTGATCTTACTATCACCCATGACAATAAAACCATTGTAGCAGCGAGTAGCTCGAACAACTTGTATGTTTGGGATGTTAATTCTGGCCGAATCCGCCATACACTTACTGGACACACTGATAAAGTATGTGCGGTTGATGTGAGTAAGGTCTCCAGTCGCCACGCTGTCAGTGCAGCTTATGATCGAACTATAAAAGCTTGGGATTTGCAGAAAGGTTACTGCTCAAATACAATAATCTTCCCGAGCAACTGCAATTCTGTTTGTTTTAGCGTGGATGGAAGAACAATATGTTCGGGTCATGTTGATGGGAACCTCCGGCTATGGGATATACAGACAGGAAAGCTACTCAGTGAAGTAGCAGCTCATTCACTTGCAGTGACATCAATCTCTTTGTCCCGAGATGGAAATACAATATTGACGAGCGGGAGAGACAATTTGCATAATCTGTTTGATGTCCGGTCCCTTGAAGTTTGTGGGACATTGAGGGGGAGTGGAAACAGAGTAGCATCTAACTGGAGCAGATCCTGTATCAGTGCTGACGACAACTATGTTGCTGCTGGATCTGCTGACGGATCTGTACATATTTGGTCGATAAAGAAGGGAGATATAGTTAGTACACTCAAGGAACATGGCGCTCCTGTTTTGTGCTGTACGTGGAGTGATCTTGGGAAGCCTTTAGCTACATCTGACAAGAATGGTGTTATTTGCACCTGGACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43783.p1 GENE.S_Transcript_43783~~S_Transcript_43783.p1 ORF type:complete len:511 (+),score=103.68,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.016,WD40|PF00400.28|14,WD40|PF00400.28|0.0081,WD40|PF00400.28|0.023,WD40|PF00400.28|1.4,WD40|PF00400.28|0.0044,WD40|PF00400.28|13,ATG16|PF08614.7|4e-18,Ge1_WD40|PF16529.1|1.8e+03,Ge1_WD40|PF16529.1|5.5e-05,Ge1_WD40|PF16529.1|36,eIF2A|PF08662.7|0.00017,eIF2A|PF08662.7|1e+02 S_Transcript_43783:251-1783(+)
MSEEEEIGIEAIKQAIKALRKRHLVEEAAHSPAITAISKPLVFQGSEWKEKAENLELELQQCYKAQSRLSEQLVVEVAECRAAKTLIQEKETAIDNLQEEVAHLSNECSELKALLDEKTKALELVTSENEELKRQLEETTLKAKNAEAENKMLVDRWMLQKMQDAERINEANALYEDMLGQLRASGIQQLARQQVDGVVRQSEEGAEYFVESSIPKTCTNRIHAHDGGCASILFEYNSNKLISGGQDRSIKMWDTSTGSLSRTLYGCLGSVLDLTITHDNKTIVAASSSNNLYVWDVNSGRIRHTLTGHTDKVCAVDVSKVSSRHAVSAAYDRTIKAWDLQKGYCSNTIIFPSNCNSVCFSVDGRTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAVTSISLSRDGNTILTSGRDNLHNLFDVRSLEVCGTLRGSGNRVASNWSRSCISADDNYVAAGSADGSVHIWSIKKGDIVSTLKEHGAPVLCCTWSDLGKPLATSDKNGVICTWT*

Click here to download the sequence:
Link to NCBI Protein BLAST