Transcript Information: S_Transcript_43795.p1


Annotated TAIR IDAT5G63350.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 103 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25380216-25381124 | Reverse length=302
E-Value3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.922636066623
Replicate 26.5678246370637
Replicate 37.4623787621505
Condition 2: 8 Hour
Replicate 16.0401394539856
Replicate 29.1815101353791
Replicate 310.719530298459
Condition 3: 24 Hour
Replicate 122.665645009027
Replicate 221.419267010016
Replicate 328.866848509902


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43795.p1 GENE.S_Transcript_43795~~S_Transcript_43795.p1 ORF type:5prime_partial len:346 (+),score=43.77 S_Transcript_43795:1-1038(+)
GTCTCCCTCTCTTTGCCCTATAAATTCCACCCCTCACTGTGTCTGGTGCGGGAGGGTGATGAATATTTTGTGCTAGAGATAGAAAGAGAAACCAAAACTCCTTCAATCTCTCATTTTCTTCCATTTTCCTTTAAAAAGGAGGAGGGTGGTAAAAGTAATATCATGGAGATGAGAGGATCTGGTGCGGGAGGGTGTTGCATAGAGAGCAGGTATGGCGGTAACCCTAATAGTAGTAATTATTGTTCTGTAGATCCGTATGACTTATCTAAAATGGACCGGATCATGCTCCGTTTCCGGCCCATAGCTCCGAAGCCCGTTCCCGGGGGCGGCCCACCAGCCCAGCCGCAAAACGACGACGTTAAAGCCTCCGGGAAAGGTAAACGAAAAGGTGGCGCTTCCAACAATAATAAGAGAAGAAAGTCAAGTTCTCCTGTTAATAATCGTGGCAAGGGACACGTTGTCACACTTCCGCTGTTACCGGAAGCACCTGATCTGATGAGCCCGAAAGATCAGGGCCGTACATCATCATCATCATCATCAGCCACGTGGCTGAGTTTCGGGGGGTCAGATCAGGAAGAGCAAGATCCAGCGGTGGTGGTGGTATCGAGTGTGGTGGTGGAAGGTGTGATGGACACGTGGCTAGATGGGAAGGGGTTAGGGTGTACGGATGAGGAAAGGAGGATGAGGCTGATGGAGGACACGTGTCCTGGGTTTATATCCGACGGTTGGAATCGAGTTTGGTGGACAAACGATGCCTACCGTCGGATGGCGATAACTGGAGATGTTAGTCAGAAGAACACGTGTCAGAGTCAGGGTGGGAAGGAAAGCCACGTGGTGGTGGTTAAGCTGGGGTTGAGAGAAAAGGTGGAGTTACCAGGAGAGAAGTTATACCCTGCGTTCACGTGTAGGGTAAGGGTGCAGTACGGAAAAGAGGGGAGCCATTGGATGACGGTGCCTTGTGATGTATGGAAAATGGACGGTGGAGGTTATGCATGGCGGTTGGATGTTAAAGCTGCTCTTAGCCTTGCTTTGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43795.p1 GENE.S_Transcript_43795~~S_Transcript_43795.p1 ORF type:5prime_partial len:346 (+),score=43.77 S_Transcript_43795:1-1038(+)
VSLSLPYKFHPSLCLVREGDEYFVLEIERETKTPSISHFLPFSFKKEEGGKSNIMEMRGSGAGGCCIESRYGGNPNSSNYCSVDPYDLSKMDRIMLRFRPIAPKPVPGGGPPAQPQNDDVKASGKGKRKGGASNNNKRRKSSSPVNNRGKGHVVTLPLLPEAPDLMSPKDQGRTSSSSSSATWLSFGGSDQEEQDPAVVVVSSVVVEGVMDTWLDGKGLGCTDEERRMRLMEDTCPGFISDGWNRVWWTNDAYRRMAITGDVSQKNTCQSQGGKESHVVVVKLGLREKVELPGEKLYPAFTCRVRVQYGKEGSHWMTVPCDVWKMDGGGYAWRLDVKAALSLALF*

Click here to download the sequence:
Link to NCBI Protein BLAST