Transcript Information: S_Transcript_438090.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20955119082819
Replicate 20.34744550484275
Replicate 30.43565518307718
Condition 2: 8 Hour
Replicate 10.16791645919002
Replicate 20.35231257700357
Replicate 30
Condition 3: 24 Hour
Replicate 10.17200695661885
Replicate 20.17845520926258
Replicate 30.19859877484343


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_438090.p2 GENE.S_Transcript_438090~~S_Transcript_438090.p2 ORF type:complete len:127 (+),score=12.28,RVT_1|PF00078.23|1.1e-17 S_Transcript_438090:3254-3634(+)
ATGATCAAGATAGACATAAGAAAGGCTTATGATACAGTTGGTTGGGAATTTGTCAGGAGTACTTTACTGTACTTTGGATTCCTAGTGGATTTTGTGGATAGAGTGATGACCTGCATAAGCTCATCCCAATTCTCAATCAACCTCAGTGGTGCGCTGAAGGGGTTCTTTGAGGGAGGGTGTGGAGTGAGGCAGGGTGACCCCATGGCCCCTTACCTTTTTGTGCTGTGTATGGAAGTGCTAGCACGGATGCTGAGGAAGTGTTTTCACAAAGAGAAGTTCAACGCACACCTTAAATGTCATAAAGTCAAGTTCAATCATCTGGCATTTCAGATGATTTGTTGTTCTTATGTAGAGGGGACCTGGAGCCTGCAAGGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_438090.p2 GENE.S_Transcript_438090~~S_Transcript_438090.p2 ORF type:complete len:127 (+),score=12.28,RVT_1|PF00078.23|1.1e-17 S_Transcript_438090:3254-3634(+)
MIKIDIRKAYDTVGWEFVRSTLLYFGFLVDFVDRVMTCISSSQFSINLSGALKGFFEGGCGVRQGDPMAPYLFVLCMEVLARMLRKCFHKEKFNAHLKCHKVKFNHLAFQMICCSYVEGTWSLQGY*

Click here to download the sequence:
Link to NCBI Protein BLAST