Transcript Information: S_Transcript_438174.p1


Annotated TAIR IDAT1G17730.1
Annotated Gene Namevacuolar protein sorting 46.1
Annotated Gene Symbol(s)VPS46.1, CHMP1B
Annotation TypeOrtholog
Chromosome Positionchr1:6099210-6100153 | Forward length=203
E-Value3.2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.19353324173259
Replicate 30
Condition 2: 8 Hour
Replicate 10.37412965468654
Replicate 20.98122143156696
Replicate 30.37396223868388
Condition 3: 24 Hour
Replicate 10.38324357001042
Replicate 20
Replicate 30.66373801066095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_438174.p1 GENE.S_Transcript_438174~~S_Transcript_438174.p1 ORF type:5prime_partial len:114 (+),score=23.07 S_Transcript_438174:3-344(+)
GACCTTGAAGCTCCTTGGAAAAATTCTCATCATCACTACATAATTGAACATCACTTTGATCATTCAATTCAATCCCAGAATTATCAAATACTATCAAACATAATGGGAGGAAGCACAGAGAAGCTAATGAATCAGGTAATAGAGCTGAAGATGACATCAAAGTCCCTACAAAGACAAGCCAAGAAATGCGAAAAAGAAGAAAAATCAGAGAAGTTGAAGATCAAGAAGGCCATGGAGAAAGGCAACATGGATGGTGCTCGAATCTACGCCGAGAACGCCATCCGAGCACTTCAATTATCTCAGGCTGTCATCAAGGTTGGATGCAGTTGTTGCCAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_438174.p1 GENE.S_Transcript_438174~~S_Transcript_438174.p1 ORF type:5prime_partial len:114 (+),score=23.07 S_Transcript_438174:3-344(+)
DLEAPWKNSHHHYIIEHHFDHSIQSQNYQILSNIMGGSTEKLMNQVIELKMTSKSLQRQAKKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRALQLSQAVIKVGCSCCQA*

Click here to download the sequence:
Link to NCBI Protein BLAST