Transcript Information: S_Transcript_438175.p1


Annotated TAIR IDAT1G73030.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS46.2, CHMP1A
Annotation TypeOrtholog
Chromosome Positionchr1:27473938-27474848 | Forward length=203
E-Value8.7E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1010264133037
Replicate 20.7257496564972
Replicate 30.72800274014213
Condition 2: 8 Hour
Replicate 11.6835834460895
Replicate 21.1774657178804
Replicate 32.1035375925968
Condition 3: 24 Hour
Replicate 11.2934470487852
Replicate 20.74552011764301
Replicate 30.49780350799571


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_438175.p1 GENE.S_Transcript_438175~~S_Transcript_438175.p1 ORF type:complete len:152 (+),score=40.83 S_Transcript_438175:253-708(+)
ATGGTGCTCGAATCTACGCCGAGAACGCCATCCGAGCACTTCAATTATCTCAGGCTGTCATCAAGGTTGGATGCAGTTGTTGCCAGGCTTGACACTCAGGCTAAGATGCAGACTGTGTCCAAATCTATGGGCTCCATTGTCACCTCCCTTAGTTCTTCTCTTGCTACTGGTAACTTGCAGAAGATGTCAGAAACATTGGACAAGTTTGAGCAGCAGTTTGTGAACATGGAGGTTCAAGCAGAGTTTATGGAAAATTCAATGGCTGGATCAACCTCGCTTTCATTCCCTGAATCAGACGTTAAAAGTTTGATGCAACAAGTAGCTGACGACTATGGTTTGGAAGTTTCGGTTGGTCTTCCACAGCCTGCTGTCAATCCTGTCCTATTGAAGACGAGTGAGACAGTCGATGAGGATGATTTATCCAAGCGACTTGCAGAGCTGCAATCAAGAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_438175.p1 GENE.S_Transcript_438175~~S_Transcript_438175.p1 ORF type:complete len:152 (+),score=40.83 S_Transcript_438175:253-708(+)
MVLESTPRTPSEHFNYLRLSSRLDAVVARLDTQAKMQTVSKSMGSIVTSLSSSLATGNLQKMSETLDKFEQQFVNMEVQAEFMENSMAGSTSLSFPESDVKSLMQQVADDYGLEVSVGLPQPAVNPVLLKTSETVDEDDLSKRLAELQSRG*

Click here to download the sequence:
Link to NCBI Protein BLAST