Transcript Information: S_Transcript_43820.p1


Annotated TAIR IDAT5G17380.1
Annotated Gene NameThiamine pyrophosphate dependent pyruvate decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5724920-5726720 | Reverse length=572
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.78225264936
Replicate 2115.03615888585
Replicate 3120.65432079955
Condition 2: 8 Hour
Replicate 1100.30416042146
Replicate 2105.65792375113
Replicate 3107.0653889352
Condition 3: 24 Hour
Replicate 1105.66025225187
Replicate 2114.31308470526
Replicate 3104.64935968088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43820.p1 GENE.S_Transcript_43820~~S_Transcript_43820.p1 ORF type:complete len:570 (+),score=81.83,TPP_enzyme_N|PF02776.14|1.5e-42,TPP_enzyme_N|PF02776.14|4.1e+02,TPP_enzyme_M|PF00205.18|2e-30,TPP_enzyme_C|PF02775.17|6.5e-28 S_Transcript_43820:540-2249(+)
ATGGCAGAAACAAACCCCACCCCAATCGACGGCAACGCGCTGGTGGCTAAGTCCCTAGCACGCGCTGGGGTAAGCCACATGTTCGGGGTGGTGGGAATCCCAGTCACCTCCTTGGCGAACCGGGCCGTCCAACTCGGAATCCGGTTCATCGCCTTCCACAACGAGCAATCCGCCGGATACGCAGCCTCAGCCTACGGCTACCTCACCGGAAAACCCGGAGTCCTCCTCACCGTCTCCGGCCCTGGCTGCGTTCACGGCCTCGCCGGACTCTCCAACGCCGGCGCCAACGCGTGGCCTTTGCTCCTCATCTCCGGCTCCTCCGACCAACGTGACACCGGCAAAGGAGACTTCCAAGAACTCGACCAAATCTCCGCCGTCAAACCCTTCTCCAAATTATCCGTCAAAGCCACCGACATCTCCCAAATCCCTACCGCCGTCTTCTCCGCCCTTAACGCTACCGTTTCTGGCCGCCCTGGTGGTGCCTACCTCGACCTCCCCTCCGACGTCCTCCATCAGAAGGTTTCTGAGGCCGAGGCCGAGGAATTAATCTCCAAGGCCTTCAATCAGGAGAGAGAAAATCATGAATTAAGTATAACAGAAAAGGAGATTTCATTGGCTGTTTCAGCACTACGGCAAGCACAGAGACCCTTGATTGTGTTCGGAAAAGGAGCCGCTTATTCAAAAGCTGAGGATTCACTGAAGAAACTAGTTGAAATGACAGGAATACCCTTCTTGCCAACCCCAATGGGCAAGGGTTTACTCCCTGACAACCATGAACTAGCTGCAACTGCTGCCAGGTCCCTCGCTATTGGCCAGTGTGACGTGGCACTCATCATTGGAGCTAGGCTCAATTGGTTGCTCCACTTTGGGGAGCCACCAAAGTGGTCTAAGGACGTGAAGTTTATACTAGTGGATGTTTGTAAGGAGGAGATTGAGTTAAGGAAGCCTTACTTAGGAATAGTTGGGGATGCTAAGAAGGTTGTGGATTTGATCAACAAGGAGATTAAGGATGATCCCTTTTGTTTAGGGAGGAACCATCCTTGGGTTGAGGCGATTTCGAATAAGGTTAAGGATAATGTGTCTAGGATGGAGGGTCAGTTAGCTAAGGATGTTGTGCCTTTTAATTTCTTTACCCCTTTGAGGATTATTAGGGATGCTATGTTGGGGTTGGGGAGTCCTGCTCCGGTGTTGGTTTCCGAGGGGGCGAATACTATGGATGTGGGCCGGGCAGTGTTGCCTCAGATGGAGCCTAGGACAAGACTGGATGCGGGGACGTGGGGGACTATGGGTGTCGGTTTGGGTTACTGTATTGCCGCCGCTGTTGCTTGCCCTGAGAGGTTGGTGGTTGCTGTTGAAGGGGATTCTGGGTTCGGATTCAGTGCTATGGAAGTCGAGACATTAGTTCGATACCAGTTGCCTGTAGTAGTTATAGTGTTCAACAATGGTGGGGTATATGGCGGTGACCGAAGAAGCCCTGAGGAGGTGACAGGCCCTCACAAAGATGATCCTGCACCCACCTCCTTTGTCCCAGAGGCCAAATACCATGTTCTGATGGAAGCTTTTGGCGGAAAAGGTTATGTGGTCAGGGATCCAGCGGAGCTGAAGTCAGCCTTGGATGAATCTTTCTCCGCTAGGAAGCCGGCTGTAATAAACGTCATTATTGATCCTTATGCTGGTTCTGAAAGCGGGAGGCTGCAGCACAAGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43820.p1 GENE.S_Transcript_43820~~S_Transcript_43820.p1 ORF type:complete len:570 (+),score=81.83,TPP_enzyme_N|PF02776.14|1.5e-42,TPP_enzyme_N|PF02776.14|4.1e+02,TPP_enzyme_M|PF00205.18|2e-30,TPP_enzyme_C|PF02775.17|6.5e-28 S_Transcript_43820:540-2249(+)
MAETNPTPIDGNALVAKSLARAGVSHMFGVVGIPVTSLANRAVQLGIRFIAFHNEQSAGYAASAYGYLTGKPGVLLTVSGPGCVHGLAGLSNAGANAWPLLLISGSSDQRDTGKGDFQELDQISAVKPFSKLSVKATDISQIPTAVFSALNATVSGRPGGAYLDLPSDVLHQKVSEAEAEELISKAFNQERENHELSITEKEISLAVSALRQAQRPLIVFGKGAAYSKAEDSLKKLVEMTGIPFLPTPMGKGLLPDNHELAATAARSLAIGQCDVALIIGARLNWLLHFGEPPKWSKDVKFILVDVCKEEIELRKPYLGIVGDAKKVVDLINKEIKDDPFCLGRNHPWVEAISNKVKDNVSRMEGQLAKDVVPFNFFTPLRIIRDAMLGLGSPAPVLVSEGANTMDVGRAVLPQMEPRTRLDAGTWGTMGVGLGYCIAAAVACPERLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNGGVYGGDRRSPEEVTGPHKDDPAPTSFVPEAKYHVLMEAFGGKGYVVRDPAELKSALDESFSARKPAVINVIIDPYAGSESGRLQHKN*

Click here to download the sequence:
Link to NCBI Protein BLAST