Transcript Information: S_Transcript_438401.p1


Annotated TAIR IDAT2G17210.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7485398-7487602 | Reverse length=715
E-Value5.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18063123010304
Replicate 20.04991581347854
Replicate 30.041725647247965
Condition 2: 8 Hour
Replicate 10.096494978810557
Replicate 20.5567654638846
Replicate 30.24112949779391
Condition 3: 24 Hour
Replicate 10.049422813327136
Replicate 20
Replicate 30.22825379552141


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_438401.p1 GENE.S_Transcript_438401~~S_Transcript_438401.p1 ORF type:internal len:442 (+),score=62.25,PPR|PF01535.16|28,PPR|PF01535.16|0.41,PPR|PF01535.16|20,PPR|PF01535.16|0.028,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|0.0026,PPR|PF01535.16|0.0093,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|3.8e+03,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|6.7,PPR_2|PF13041.2|0.009,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|4e-05,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|75,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.079,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|29,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|7.5e+02,PPR_1|PF12854.3|15,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|0.0007 S_Transcript_438401:1-1323(+)
GCAGTCTCTTGCTATGTTGCAATGACAATGTCTGGCTTTCAACTCTCAGATTCTTCACTCTTTCCTTCTATCATGAAAGCAAGTTCACAAGTTTCCTTCAAACAAGGACAGTTAATGCATGCTTGTTCAGTTAAAAGAGGATATGATTCCTTTACTTCAGTAGGGAACTCTATCTTGGATTTTTACATGAAGTGGGGTGCTCCCAATTCAGCTTTATCCTTTTTTAACAACATCGATAACAGAGACTCTGTTTCTTGGAACATTATCATACATGGGCACCTTGATCATGGTAGTTTAGAAGCTGGGCTTTGGTGTTTTCTCAATGGCCGAGTTTCGGGTTTTGAACCAAATGTTTCCACCTTGGTTCTTGTAGCTCAAGCGTGTCGTGCTCTTTGTGTTTTCGATGACGGGGTAAATTTTCATGCTTACATATTGAAGAGTGGCTTCTTGTGTGTCATTTCTCTTCAAAATTCCATGTTGGGCATGTACGCGGACTTTGATATGGAATATGCACACCAGTTGTTCGATGAAATGTGTGACAGAGATGTTATATCTTGGAGTTTGATGACTGGGGCTTATGTTCAGAATGAAGAACCATTACTGGCACTGCAGATGTTCAAGGATATGCAGCACTGGGTTGAGCCAGATGGGTTAACTATGGTTAGTGTTCTTAGGGCGTGTGGCATCCTTGGTGATGCTAACATGGGAAGATCTTTTCATGCGTCAATGATCTTTAGAGGGCACGATGATGATATGTTTGTTGGGAACTCTTTGATTGATATGTATTCAAGGTGTGATGACCCAATCTCTTCCTTAAGGGTTTTTAATGAGATGGCCAACAAGAACGTTGTGTCGTGGAATTCAATCTTATCAGGGTTGGTTCATAATGAAATGTATCCAGAAGCTTTAACTATAGCCAAATCCATGGTGCAGGCAGATGCTGAAGCAGATGAAGTGACTCTAGTCAATTTTCTTCAACTATGCAAGCATTTTTCTGAGCCATATCAGTGCAAACTAATCCATTCCAGAGTTATTCGATGCAGGTACGAGTCAAATGCCTTGGTCCTAAGTTCCTTAATTGATGCTTATGCCAAGTGCAATCTTATTGACCTTGCATGGAAACTATTTAGCAAAATGGATAGAAGGGATACAGTTACATGGGCCACGATGATTGGGGGATTCGCCTTTTGTGGCATGCCTAATGAGGCAATGATTGTATTTCGACAGATGACTGAAACTGGCGAGAGAGTTAATACAGTTATAGTCATAAACCTGATTGAAGCATGTTCTGTTTTTGCTGAACTAAACAGATCTAAATGGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_438401.p1 GENE.S_Transcript_438401~~S_Transcript_438401.p1 ORF type:internal len:442 (+),score=62.25,PPR|PF01535.16|28,PPR|PF01535.16|0.41,PPR|PF01535.16|20,PPR|PF01535.16|0.028,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|0.0026,PPR|PF01535.16|0.0093,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|3.8e+03,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|6.7,PPR_2|PF13041.2|0.009,PPR_2|PF13041.2|0.81,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|4e-05,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|75,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.079,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|29,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|7.5e+02,PPR_1|PF12854.3|15,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|0.0007 S_Transcript_438401:1-1323(+)
AVSCYVAMTMSGFQLSDSSLFPSIMKASSQVSFKQGQLMHACSVKRGYDSFTSVGNSILDFYMKWGAPNSALSFFNNIDNRDSVSWNIIIHGHLDHGSLEAGLWCFLNGRVSGFEPNVSTLVLVAQACRALCVFDDGVNFHAYILKSGFLCVISLQNSMLGMYADFDMEYAHQLFDEMCDRDVISWSLMTGAYVQNEEPLLALQMFKDMQHWVEPDGLTMVSVLRACGILGDANMGRSFHASMIFRGHDDDMFVGNSLIDMYSRCDDPISSLRVFNEMANKNVVSWNSILSGLVHNEMYPEALTIAKSMVQADAEADEVTLVNFLQLCKHFSEPYQCKLIHSRVIRCRYESNALVLSSLIDAYAKCNLIDLAWKLFSKMDRRDTVTWATMIGGFAFCGMPNEAMIVFRQMTETGERVNTVIVINLIEACSVFAELNRSKWA

Click here to download the sequence:
Link to NCBI Protein BLAST