Transcript Information: S_Transcript_43858.p1


Annotated TAIR IDAT3G49140.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18212187-18215557 | Reverse length=499
E-Value2E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.937251405244
Replicate 222.062789557515
Replicate 323.839663063854
Condition 2: 8 Hour
Replicate 114.276787622838
Replicate 213.140517411545
Replicate 39.7379766953283
Condition 3: 24 Hour
Replicate 122.856646515422
Replicate 226.003741703388
Replicate 321.929903872238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43858.p1 GENE.S_Transcript_43858~~S_Transcript_43858.p1 ORF type:complete len:475 (+),score=128.96 S_Transcript_43858:405-1829(+)
ATGGCAAGTCCAGTTATCATCCATTTGAAGATATTTCCGACTCAGAAACTTCAGAAGCGAGAGAGGGTCGACTTTCTGCTCCTGAAATTAGCAGAACCATCATTGAGTGTAGAAATAGGAGCTCAATTTGAGTGGTTAAGCAAGATATGGTTCAGCAATGGGATTATCAAAACTTCACAGGGGATTTCCTATGTCAATTTGTGTGGAATATTTTTTGGACGATTGTTCTATTCTGAGCCTTATTTGTGGCATGTATGCTGTCAGGTGAACAGCCAAGCAACTCTCATGTTCTCTGGCTCAATCAACGATGAAGTGCATGAGAATATTTTCTGGCCAGATCTTCCTTACCTGACTGATGAACATGGAAATGTTTACTTCCAGGTGAATAATGATGAAGATATTTTGCAGACACTGACATCTGACAATAACTATGTGCAAGTCATTGTTGGTCTAGACACGAAGGAAATGTTGGCTGAGATGGAGTTGTCGGGTCCAGCAGCAATTGATTTTGGCATTGAGGAAATCGAGGAGGAAGATAGTGATTTTGATGAAGATGATGACGATGACGACAATGATGATGATGAAGATGATGACCTTGAGGGGAATTGGGTTGACATTCTTGATGCTGAAGATGATCAGGCTGATTCAGATGGATCGCTGGGGGACTGGGCAAAATTAGACACGATGCGATCTTCTCATCCTATGTATTTTGCCAAAAAGATTGCTGAGGTTGCTTCTGATGATCCTATTGATTTCATGGAGCAGCCTCCTGCTGGACTGGCCATACAAGGCCTTCTAAGACCTGCCTTTATTGAAGAACGCTCAGTCATGCAGAAGCACAGGTCCAATCGCCCAGATATTAATGGTGACATCAGCATGGCCGAAAAGGCTGTTGATGCCAAGGTTGAAGATGTAGGTATAGTTAATGGCCGTGCACCTGAGCCAGCTTCATCTGATGATAATTCTGTGTGGACTGACGATTTGGAAAAGGACAATGGCTCAGCAAATGGGACAGCATTCTATAAACTAGAGATGATTAGGATTCAGTTGATTTCATCCCATGGGCATCAGACTGTTGTTGAGATGGAAGATTACAGAAAGGCTTGCCCTGATGCAATTGCTCATTCAGCTAGTAAAATCATATCTCGTGTTAATGCGGCCGGAGAGAAGACCACTAATGCCCTCAAATCTCTCTGTTGGAGGTGCAAGGGCCTTCAAGTAGAGGAGGCCTCACTTATTGGCATAGACACCCTTGGTTTTGACTTGAGAGTTTGCTCAGGAACACAAGTACAAACTTTGCGGTTTGCATTCAATTCACGGGCTATGTCAGAGTACAGTGCTGAGAGACAGCTAAATGATTTGCTGTTCCCACGAAGCAATCAGAAAGGGCATAAAGTGAAACAGGCCCGGCGAAAGCAAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43858.p1 GENE.S_Transcript_43858~~S_Transcript_43858.p1 ORF type:complete len:475 (+),score=128.96 S_Transcript_43858:405-1829(+)
MASPVIIHLKIFPTQKLQKRERVDFLLLKLAEPSLSVEIGAQFEWLSKIWFSNGIIKTSQGISYVNLCGIFFGRLFYSEPYLWHVCCQVNSQATLMFSGSINDEVHENIFWPDLPYLTDEHGNVYFQVNNDEDILQTLTSDNNYVQVIVGLDTKEMLAEMELSGPAAIDFGIEEIEEEDSDFDEDDDDDDNDDDEDDDLEGNWVDILDAEDDQADSDGSLGDWAKLDTMRSSHPMYFAKKIAEVASDDPIDFMEQPPAGLAIQGLLRPAFIEERSVMQKHRSNRPDINGDISMAEKAVDAKVEDVGIVNGRAPEPASSDDNSVWTDDLEKDNGSANGTAFYKLEMIRIQLISSHGHQTVVEMEDYRKACPDAIAHSASKIISRVNAAGEKTTNALKSLCWRCKGLQVEEASLIGIDTLGFDLRVCSGTQVQTLRFAFNSRAMSEYSAERQLNDLLFPRSNQKGHKVKQARRKQS*

Click here to download the sequence:
Link to NCBI Protein BLAST