Transcript Information: S_Transcript_43859.p1


Annotated TAIR IDAT3G49140.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18212187-18215557 | Reverse length=499
E-Value7.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.543341028201
Replicate 246.927203185825
Replicate 356.133248317943
Condition 2: 8 Hour
Replicate 131.734211781448
Replicate 233.690938725303
Replicate 334.257612222291
Condition 3: 24 Hour
Replicate 155.088981977272
Replicate 244.473233430571
Replicate 352.796144538487


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43859.p1 GENE.S_Transcript_43859~~S_Transcript_43859.p1 ORF type:complete len:504 (+),score=150.84 S_Transcript_43859:161-1672(+)
ATGATGTTGATTGATACAACCACCATGGCTATTCAATTAAGTTCCTCTTCTCCTATTGCCTTTTGCCGCTCAGTGTGGAACTCCAACGATGTTATGGGTGTCAACCTTGGCCTCCCTAGGAACCAAATAAAGAGATTGAGGAAAAAATTGGATTCTTGTTTCAACAAAAGAAATGGGTCTTTGAAGAATAGGGTTCAAGCATCTGGGAAGTATCTGGGGGCAGGTTCTGATCAAGTAGGGGAGAATGGCAAGTCCAGTTATCATCCATTTGAAGATATTTCCGACTCAGAAACTTCAGAAGCGAGAGAGGGTCGACTTTCTGCTCCTGAAATTAGCAGAACCATCATCGAGGTGAACAGCCAAGCAACTCTCATGTTCTCTGGCTCCATCAATGATGAAGTGCATGAGAACATTTTCTGGCCAGATCTTCCTTACCTGACTGATGAACATGGAAATGTTTACTTCCAGGTGAATAATGATGAAGATATTTTGCAGACACTGACATCTGACAATAACTATGTGCAAGTCATTGTTGGTCTAGACACGAAGGAAATGTTGGCTGAGATGGAGTTGTCGGGTCCAGCAGCAATTGATTTTGGCATTGAGGAAATCGAGGAGGAAGATAGTGATTTTGATGAAGATGATGACGATGACGACAATGATGATGATGAAGATGATGACCTTGAGGGGAATTGGGTTGACATTCTTGATGCTGAAGATGATCAGGCTGATTCAGATGGATCGCTGGGGGACTGGGCAAAATTAGACACGATGCGATCTTCTCATCCTATGTATTTTGCCAAAAAGATTGCTGAGGTTGCTTCTGATGATCCTATTGATTTCATGGAGCAGCCTCCTGCTGGACTGGCCATACAAGGCCTTCTAAGACCTGCCTTTATTGAAGAACGCTCAGTCATGCAGAAGCACAGGTCCAATCGCCCAGATATTAATGGTGACATCAGCAAGGCCGAAAAGGCTGCAGATGCCGAAGTTGAAGATGCAGGTATAATTAATGGCCATGCATCTGAGCCAGCTTCATCTGATGATAATTCTGTGTGGACTGACGATTTGGAAAAGGACAATGGCTCAGCAAATGGGACAGCATTCTATAAACTAGAGATGATTAGGATTCAGTTGATTTCATCCCATGGGCATCAGACTGTTGTTGAGATGGAAGATTACAGAAAGGCTTGCCCTGATGCAATTGCTCATTCAGCTAGTAAAATCATATCTCGTGTTAATGCGGCCGGAGAGAAGACCACTAATGCCCTCAAATCTCTCTGTTGGAGGTGCAAGGGCCTTCAAGTAGAGGAGGCCTCACTTATTGGCATAGACACCCTTGGTTTTGACTTGAGAGTTTGCTCAGGAACACAAGTACAAACTTTGCGGTTTGCATTCAATTCACGGGCTATGTCAGAGTACAGTGCTGAGAGACAGCTAAATGATTTGCTGTTCCCACGAAGCAATCAGAAAGGGCATAAAGTGAAACAGGCCCGGCGAAAGCAAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43859.p1 GENE.S_Transcript_43859~~S_Transcript_43859.p1 ORF type:complete len:504 (+),score=150.84 S_Transcript_43859:161-1672(+)
MMLIDTTTMAIQLSSSSPIAFCRSVWNSNDVMGVNLGLPRNQIKRLRKKLDSCFNKRNGSLKNRVQASGKYLGAGSDQVGENGKSSYHPFEDISDSETSEAREGRLSAPEISRTIIEVNSQATLMFSGSINDEVHENIFWPDLPYLTDEHGNVYFQVNNDEDILQTLTSDNNYVQVIVGLDTKEMLAEMELSGPAAIDFGIEEIEEEDSDFDEDDDDDDNDDDEDDDLEGNWVDILDAEDDQADSDGSLGDWAKLDTMRSSHPMYFAKKIAEVASDDPIDFMEQPPAGLAIQGLLRPAFIEERSVMQKHRSNRPDINGDISKAEKAADAEVEDAGIINGHASEPASSDDNSVWTDDLEKDNGSANGTAFYKLEMIRIQLISSHGHQTVVEMEDYRKACPDAIAHSASKIISRVNAAGEKTTNALKSLCWRCKGLQVEEASLIGIDTLGFDLRVCSGTQVQTLRFAFNSRAMSEYSAERQLNDLLFPRSNQKGHKVKQARRKQS*

Click here to download the sequence:
Link to NCBI Protein BLAST