Transcript Information: S_Transcript_438644.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64559841271327
Replicate 20.23787374186
Replicate 30.44739791038384
Condition 2: 8 Hour
Replicate 10.51732752790889
Replicate 20.66331626694607
Replicate 30.63200626322047
Condition 3: 24 Hour
Replicate 10.4710487006058
Replicate 20.42761908634618
Replicate 30.74782341901962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_438644.p1 GENE.S_Transcript_438644~~S_Transcript_438644.p1 ORF type:complete len:371 (+),score=15.27,zf-RING_2|PF13639.2|2.3e-14,zf-RING_11|PF17123.1|1.4e-11,zf-rbx1|PF12678.3|1.9e-08,zf-C3HC4_2|PF13923.2|2.9e-06,zf-C3HC4|PF00097.21|4.2e-06,zf-RING_5|PF14634.2|2e+03,zf-RING_5|PF14634.2|1.2e-05 S_Transcript_438644:84-1196(+)
ATGAAGAGCAACAAGTACCAGAATAGGAGTATAATTAACAGATCCCCTGATGGAATTGTTAAATACTACCAGGTCATGTTGCTGTTAGTCCTATTTCTCTCTCCCATCGCGGCAGGGCAGCAGCCAAAGGATTCGGATGATAAATCATCATCCAATAACGACTTCAACACTCTCAACAACAGCAACGTTAGTCCATCAGTGACGGTGATAGTGATAGTACTAGTCGTAGCCTTCCTCTTCACCGGTTGCCTTGCTATCTACATCCAGCAATGCGTTGACAATTCCCCTTCTTCTACTAGGGGTTCGGTTGTCATCACCGGAGAAAACCGGTCAAGGAGAGTACAAACCAGAGGCCTTGACCGGTCCGTTATCGAGACTTTTCCGAGTTTCCTTTATTCAGCGGTTAAGGAATTGAAAATCGGAAAAGAAACGCTGGAATGCGCAGTTTGTCTCAACGAGTTTCAAGAAGACGAAACTCTCCGTTTGCTCCCTAAATGTGATCACGTTTTTCATGCTCAGTGTATCGACGCTTGGCTTGTGGGCCACACCACTTGCCCAGTTTGTCGAGCTAATCTTGGTCTTGATCCGGCTCAAACCGGAAACCCGGTCGAGTCCATTCACGAGCACGATTTAGAAGGTCATGACCCGGAGCTCCCTCTCTCCACCGATGTAGCTCAAAGCTACGACGACGTCGTTCAGGTAACAATCCCTGAAGAGACTACTAGGAAGAATGATAGGAATGACAAGTTTCCGAGATCGCACTCGACGGGTCACTCAGTGATTCAACCAGGAGATGACTGTGAGAGATTCAGGCTAAGGTTGCCGGCTGAGGTTCGAAGACAGCTGATGGCTCGGACGAAGCTGAAGAGAGCCACGAGCATGGTGGCTCTACCTCGAGAGTCGAGCTCGAGAAGAGGGTTTAGGATCAGTGGAGGAGGAGAAGGGAGTGGTAGTAGACGTTATGGCCGGTTTTTTGGTCCGTTGATATCACGAGTGAATTCGTTAAGGTTAACGGCGAGGGGTACGGCTGACGGAGATTTAGCCACGTCCAATTCCACTTCCAAGAGGTTTTTGGGGACCGCCGTTAAGCCGTTGGAGTCCCTTCCTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_438644.p1 GENE.S_Transcript_438644~~S_Transcript_438644.p1 ORF type:complete len:371 (+),score=15.27,zf-RING_2|PF13639.2|2.3e-14,zf-RING_11|PF17123.1|1.4e-11,zf-rbx1|PF12678.3|1.9e-08,zf-C3HC4_2|PF13923.2|2.9e-06,zf-C3HC4|PF00097.21|4.2e-06,zf-RING_5|PF14634.2|2e+03,zf-RING_5|PF14634.2|1.2e-05 S_Transcript_438644:84-1196(+)
MKSNKYQNRSIINRSPDGIVKYYQVMLLLVLFLSPIAAGQQPKDSDDKSSSNNDFNTLNNSNVSPSVTVIVIVLVVAFLFTGCLAIYIQQCVDNSPSSTRGSVVITGENRSRRVQTRGLDRSVIETFPSFLYSAVKELKIGKETLECAVCLNEFQEDETLRLLPKCDHVFHAQCIDAWLVGHTTCPVCRANLGLDPAQTGNPVESIHEHDLEGHDPELPLSTDVAQSYDDVVQVTIPEETTRKNDRNDKFPRSHSTGHSVIQPGDDCERFRLRLPAEVRRQLMARTKLKRATSMVALPRESSSRRGFRISGGGEGSGSRRYGRFFGPLISRVNSLRLTARGTADGDLATSNSTSKRFLGTAVKPLESLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST