Transcript Information: S_Transcript_43890.p1


Annotated TAIR IDAT5G12250.1
Annotated Gene Namebeta-6 tubulin
Annotated Gene Symbol(s)TUB6
Annotation TypeOrtholog
Chromosome Positionchr5:3961317-3962971 | Reverse length=449
E-Value3.5e-323
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 193.264845135846
Replicate 285.382006224822
Replicate 377.94743838024
Condition 2: 8 Hour
Replicate 1119.58475601603
Replicate 2116.17309742064
Replicate 3129.42447379885
Condition 3: 24 Hour
Replicate 148.636702480179
Replicate 260.0133665284
Replicate 366.165452811627


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43890.p1 GENE.S_Transcript_43890~~S_Transcript_43890.p1 ORF type:5prime_partial len:446 (+),score=87.60,Tubulin|PF00091.21|3e-68,Tubulin_C|PF03953.13|1.5e-40 S_Transcript_43890:1-1338(+)
CACAAAATGAGAGAAATTCTGCACATTCAAGGTGGTCAATGCGGGAACCAAATTGGAGCAAAATTCTGGGAAGTTATATGCGATGAACATGGGATTGATCATACGGGTAAGTATAGCGGGGACTCAGATCTGCAATTAGAACGCATCAATGTTTATTACAATGAGGCTAGTGGTGGAAGGTATGTCCCACGGGCTGTTCTCATGGATCTGGAGCCTGGAACCATGGATTCTGTTCGATCCGGCCCATTTGGTCAAATTTTTAGACCCGACAATTTTGTTTTCGGTCAGTCTGGTGCCGGTAATAACTGGGCTAAGGGTCATTACACCGAAGGTGCCGAGCTTATTGATTCCGTTCTTGATGTTGTCAGAAAAGAGTCTGAGAACTGTGACTGTCTTCAAGGGTTCCAAGTATGCCACTCCCTTGGAGGTGGTACCGGTTCTGGTATGGGAACTTTGCTCATTTCAAAGATTAGGGAGGAGTACCCTGATCGAATGATGCTTACCTTCTCAGTGTTCCCATCACCTAAGGTTTCTGACACAGTGGTTGAGCCTTACAATGCTACCCTTTCCGTTCACCAGCTAGTCGAGAATGCTGATGAGTGTATGGTGCTTGACAATGAGGCTCTGTACGATATTTGCTTCAGGACTCTTAAGCTGACAACCCCCAGCTTTGGTGATCTGAACCATTTGATCTCTGCTACCATGAGTGGTGTGACCTGCTGCCTGAGATTCCCTGGTCAGTTGAACTCTGATCTCCGCAAACTTGCTGTGAACCTCATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGGTTCGCTCCTCTCACCTCCCGTGGCTCCCAGCAGTACCGTGCCCTCACAGTCCCTGAGCTGACACAGCAGATGTGGGATGCAAAGAACATGATGTGTGCTGCTGACCCTCGTCACGGTCGTTACCTCACTGCCTCTGCCATGTTCAGGGGTAAGATGAGCACCAAGGAGGTTGACGAGCAGATGATCAACGTCCAGAACAAGAACTCATCCTACTTTGTTGAGTGGATCCCCAACAATGTCAAGTCCAGTGTCTGTGACATCCCCCCAAGAGGCCTCTCGATGGCTTCTACTTTCATTGGAAACTCCACATCAATTCAGGAGATGTTCAGGCGTGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGGTATACAGGGGAAGGTATGGATGAGATGGAGTTTACTGAGGCTGAGAGTAACATGAATGACTTGGTTTCAGAGTATCAGCAGTACCAGGAAGCTGGATTGGAGTACGAGGAGGATGATTACGAGGAAGGTTACGAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43890.p1 GENE.S_Transcript_43890~~S_Transcript_43890.p1 ORF type:5prime_partial len:446 (+),score=87.60,Tubulin|PF00091.21|3e-68,Tubulin_C|PF03953.13|1.5e-40 S_Transcript_43890:1-1338(+)
HKMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKESENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGLEYEEDDYEEGYEN*

Click here to download the sequence:
Link to NCBI Protein BLAST