Transcript Information: S_Transcript_43891.p1


Annotated TAIR IDAT5G12250.1
Annotated Gene Namebeta-6 tubulin
Annotated Gene Symbol(s)TUB6
Annotation TypeOrtholog
Chromosome Positionchr5:3961317-3962971 | Reverse length=449
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1299.58951183006
Replicate 2268.32380163102
Replicate 3254.60158900473
Condition 2: 8 Hour
Replicate 1338.77284991346
Replicate 2344.53575197654
Replicate 3338.40013666663
Condition 3: 24 Hour
Replicate 1175.21228127518
Replicate 2188.59864778575
Replicate 3219.2015435955


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43891.p1 GENE.S_Transcript_43891~~S_Transcript_43891.p1 ORF type:5prime_partial len:482 (+),score=96.80,Tubulin|PF00091.21|3.3e-68,Tubulin_C|PF03953.13|1.7e-40 S_Transcript_43891:3-1448(+)
GGGGGACTCACCCTTTCTCATTCTCACACTCTCACTCTCTTTCTCTCTCTAGCGAACTCTCACTTTGTAAGTTTCTATTCCTCTCTCTTCACAGGAAATATGAGAGAAATCCTTCACGTACAAGGTGGGCAGTGTGGAAACCAGATTGGGTCCAAATTCTGGGAGGTTGTCTGTGATGAGCATGGCATTGACCCTACCGGTAGGTATGTCGGTACCTCTGACCTCCAGTTGGAGCGTGTCAATGTCTACTACAACGAGGCCTCTTGTGGTAGATTTGTCCCTCGTGCTGTGCTTATGGACCTTGAGCCTGGTACCATGGATGCTGTGAGAACTGGCCCTTATGGTCAGATCTTCCGTCCCGACAACTTTGTTTTTGGACAATCTGGTGCTGGTAACAACTGGGCTAAGGGACATTACACCGAGGGTGCTGAGCTTATTGACTCGGTTCTGGATGTTGTCAGAAAGGAAGCCGAGAACTGTGACTGCCTTCAAGGATTCCAGGTGTGCCACTCTTTGGGAGGAGGTACAGGATCTGGTATGGGTACCTTGTTGATCTCAAAGATTAGGGAGGAGTACCCAGACAGGATGATGTTGACGTTCTCCGTCTTCCCATCACCAAAGGTGTCGGACACAGTTGTTGAGCCATACAATGCTACTCTCTCTGTTCACCAGCTTGTTGAGAATGCAGATGAGTGTATGGTGCTCGATAATGAGGCTCTTTACGATATTTGCTTCAGGACTCTCAAGCTCACCACACCTAGCTTCGGTGATCTGAACCACTTGATCTCAGCCACCATGAGTGGTGTGACATGCTGTCTCCGTTTCCCTGGTCAACTCAACTCTGACCTCCGCAAGCTTGCAGTGAACTTGATCCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGGTTTGCCCCCTTGACCTCCCGTGGTTCCCAGCAGTACCGTGCTCTCACCGTCCCTGAGCTGACCCAGCAGATGTGGGATGCCAAGAACATGATGTGTGCCGCTGACCCAAGGCACGGGCGGTACCTCACCGCCTCAGCCATGTTCCGTGGCAAGATGAGCACCAAGGAGGTGGATGAACAGATGATCAATGTCCAGAACAAGAACTCATCCTACTTTGTTGAGTGGATCCCCAACAATGTCAAGTCCAGTGTCTGTGACATCCCCCCAAGAGGCCTCTCGATGGCTTCTACTTTCATTGGAAACTCCACATCAATTCAGGAGATGTTCAGGCGTGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGGTACACTGGGGAAGGTATGGACGAGATGGAGTTCACTGAGGCCGAGAGCAACATGAACGATCTTGTGTCAGAGTACCAGCAGTACCAGGATGCCACTGCTGACGATGAGCTGGAGTATGAGGATGAGGAGGAAGGAATGGAGGATTACCAGAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43891.p1 GENE.S_Transcript_43891~~S_Transcript_43891.p1 ORF type:5prime_partial len:482 (+),score=96.80,Tubulin|PF00091.21|3.3e-68,Tubulin_C|PF03953.13|1.7e-40 S_Transcript_43891:3-1448(+)
GGLTLSHSHTLTLFLSLANSHFVSFYSSLFTGNMREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDELEYEDEEEGMEDYQN*

Click here to download the sequence:
Link to NCBI Protein BLAST