Transcript Information: S_Transcript_43904.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6081707199632
Replicate 23.1632674683188
Replicate 32.7111826184603
Condition 2: 8 Hour
Replicate 12.593105537655
Replicate 23.2075790245706
Replicate 32.4758879250795
Condition 3: 24 Hour
Replicate 13.1320250376714
Replicate 22.9203822539395
Replicate 32.8838272187338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43904.p1 GENE.S_Transcript_43904~~S_Transcript_43904.p1 ORF type:complete len:551 (+),score=51.71,zf-RVT|PF13966.2|6.8e+02,zf-RVT|PF13966.2|3.8e-15,zf-RVT|PF13966.2|1.5e+04 S_Transcript_43904:1741-3393(+)
ATGAATATGCTCTCCCACCTCATTCAAGATAGTTGTGCTAACAAGGAATGGGAGCCTTTTAAGATTGGCAAGACAAAAATCCCTATTTCTCATCTCTTGTTTGCGGATGACCTAATCCTCTTTGGGGAAGCCAATGACTCTACCTTTTCTGCTGTGTGCGAGACCCTTGATTTATTTTGCTCTGTCTCTGGTCAAAAGGTCAATTGTGATAAGAGTAAAATCTACTTCTCTCCTAACACTTCCTCGGAGGCCATCTCTAAAGGAGAAGCTATGCTCAAGGTTAGTAGTAGTGCCGACCTTGGCCTATATTTGGGTTTTCCTCTCACTCCCAATAGGCCCAAACAATCACAGGTTAATTACATAGTTAAAAAGGTGAAAGATAAACTTTCAAATTGGAAGAGTCAATGCCTCTCTAGAGCAGGCAAGATTTGTTTGATTAACTCCACCCTTAATGCTATTCCTAATTACTACATGCACCACCTTCTCCTCCCTGCCTCCACTCTTGATGAACTCGACTCCACCATTATTCACTTTCTTTGGGGGGATAATAAGGACAAAAATAGACTTCACTTGGTAGCAAAAGAAAAAATTTTCCTTCCAAAGGAAAGGGGGCGATTAGGGATAAGGAGCAATAAAATCATGAATCACGTTTACATGACTAAGAGGAATTGGCAACTTTTGAATGACAAAGATAATTTAGCTCACCAAGTGCTTAAAAGTAAATATGTTTGGAAAAGGAATAATGGAGCTGCTGCTTTTAAGAATGGCTCCTTTATTTGGAACAATTTGGAGAAAGGTTGGGATCTTTTCAAAAACAACATCCTTTGGATCATTGGTCAAGGGGAAAACATTTCCTTTTGGGAGGATAATTGGGCTAATCTAGGTCCCTTAAGATCGATCGTTATCGGTCCTCTCAATCAGAACGAAGACTCCTTGAGGGTCAATGATTGTATTTCAAACTTCCAATGGGATTTTTCAAGGTTGTCCTTTGACCTCCCCAAATCTATCCTAAACCATCTTCTCTCTATCCCCTTTGCACCTTCTAATACTGATTTTCTCACCTCCCTTTTGGCCTCAAATGATAAATTTGATTCTAAAAGAGCTTACAATGATTTGATTCCTCCTAGTAATTTTGATGATGGTGATTGCTCTTGGATTTGGAAAATTGAGACCTTGCCAAAAATCATGTTTTTTATGTGGACAGCTTGGCTTGACAGGCTCCCTCACAATGGTTTACTGTGGACAAGAAAAATTCTCCCTTCTAATGTGTGCCCCCTTTGTAATATGGAGACTGATAACACTTCGCATATACTTAGAGACTATGTGTATTTTAAAGAGGTATGGCCACTAGACTGTTTATCGAGCGATTTCTTTAACCCCAATCTCAAAGAATGGATCTTGTTAAACCTTTCTTGCAAAACCTCTTATAACCTTCTACCTTGGCCTACTCTCTTTACTTTCACTAGCTGGACTATCTGGAAAACTAGAAACCTCTTCATCTTCAAAAATACCCCTATCCCACCTGCTAGGGTCATCTTTGATCAAGCCCTCACCAGAGCTTGGGAGTTTTGGAGCCTCCAAAACCAAACATCCAAACCACCCAAACACCCGATCCTTGTGAATTGGAAAACCTCCCCCAGACCCATGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43904.p1 GENE.S_Transcript_43904~~S_Transcript_43904.p1 ORF type:complete len:551 (+),score=51.71,zf-RVT|PF13966.2|6.8e+02,zf-RVT|PF13966.2|3.8e-15,zf-RVT|PF13966.2|1.5e+04 S_Transcript_43904:1741-3393(+)
MNMLSHLIQDSCANKEWEPFKIGKTKIPISHLLFADDLILFGEANDSTFSAVCETLDLFCSVSGQKVNCDKSKIYFSPNTSSEAISKGEAMLKVSSSADLGLYLGFPLTPNRPKQSQVNYIVKKVKDKLSNWKSQCLSRAGKICLINSTLNAIPNYYMHHLLLPASTLDELDSTIIHFLWGDNKDKNRLHLVAKEKIFLPKERGRLGIRSNKIMNHVYMTKRNWQLLNDKDNLAHQVLKSKYVWKRNNGAAAFKNGSFIWNNLEKGWDLFKNNILWIIGQGENISFWEDNWANLGPLRSIVIGPLNQNEDSLRVNDCISNFQWDFSRLSFDLPKSILNHLLSIPFAPSNTDFLTSLLASNDKFDSKRAYNDLIPPSNFDDGDCSWIWKIETLPKIMFFMWTAWLDRLPHNGLLWTRKILPSNVCPLCNMETDNTSHILRDYVYFKEVWPLDCLSSDFFNPNLKEWILLNLSCKTSYNLLPWPTLFTFTSWTIWKTRNLFIFKNTPIPPARVIFDQALTRAWEFWSLQNQTSKPPKHPILVNWKTSPRPMD*

Click here to download the sequence:
Link to NCBI Protein BLAST