Transcript Information: S_Transcript_439107.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15841072163798
Replicate 20.26265225663708
Replicate 30
Condition 2: 8 Hour
Replicate 10.12693684712579
Replicate 20.13316576571266
Replicate 30.12688004526775
Condition 3: 24 Hour
Replicate 10.26005813679279
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_439107.p1 GENE.S_Transcript_439107~~S_Transcript_439107.p1 ORF type:5prime_partial len:168 (-),score=14.62,zf-RVT|PF13966.2|4.8e-16 S_Transcript_439107:146-649(-)
GGTGGAACAAAGCTGCTATTTGCAAGCTATGCTGGGATTAATTTCACTATGAACAAGGATAAAGTGTGGATCAAATGGTTACATAAATATTATCCGGGTTTAGATCACAACAGACAAATTCTAGGGAATATGTCATGGATGTTACGGAAAGTAGTGGAGGCTAGAGAGGAGATGGCCATGACAGCAAGGGTTAGTACTATCAATACCAGAAAAATTAAGGATTTCTATGAGATGATGGCCAAAAATACCCCAACATCTCCTTGGTATCAGCTGGTATGGACAAGTTTTGCTAGGCCACGCACCAAATTTATCTTGTGGCTGCTAATGAATCAGAAATTGGCCACTAGAGATAAGATTGCAAGATGGAATCCCAGTTGTGAACTTATATGCCCTCTGTGCAATCAGGAGGATGAAAATTGTGAGCACTTGTTTACTAATACCCTTTTACCCAGGAAGTGTTTGATAGAGTGTGGCATGGTTTGCGATGTACTTGGATCCAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_439107.p1 GENE.S_Transcript_439107~~S_Transcript_439107.p1 ORF type:5prime_partial len:168 (-),score=14.62,zf-RVT|PF13966.2|4.8e-16 S_Transcript_439107:146-649(-)
GGTKLLFASYAGINFTMNKDKVWIKWLHKYYPGLDHNRQILGNMSWMLRKVVEAREEMAMTARVSTINTRKIKDFYEMMAKNTPTSPWYQLVWTSFARPRTKFILWLLMNQKLATRDKIARWNPSCELICPLCNQEDENCEHLFTNTLLPRKCLIECGMVCDVLGSR*

Click here to download the sequence:
Link to NCBI Protein BLAST