Transcript Information: S_Transcript_440053.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.27322571975705
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.18682995855642


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_440053.p1 GENE.S_Transcript_440053~~S_Transcript_440053.p1 ORF type:internal len:135 (+),score=24.75,zf-RVT|PF13966.2|2.1e-19 S_Transcript_440053:3-404(+)
TGGAACCTGTTTTTGAGGAGGTTGATTAGGGATAGAGAGGTGGAGGAGCTGGTATCTCTTTTGGGTGTTTTGGAGGGGGTGGTAATCTTGGATACTGAGGACAGACGGGTTTGGACATCGGACTCTTCTAGGACCTTTAATTGTGCTTCCTTTTTGAGTTGTTTGCAAGGCCATGCTGGTGGCTCCACCTTCCCTATTGCTCGGCTTATCTGGAAGGCAAAAGCTCCTCTCAAAGTGAGGGCTTTTGTGTGGACCTTGGCTTTAGGGAGAATCAACACTAACGATATGCGGCAACGTAGGCGGCCTCAGTGGTGTCTCTCTCCTGATAAGTGTTTCATGTGTCACAAGAGTGGGGAGACGGCTTCTCATCTCTTTCTCCACTGTCCTTTTGTGCGATCTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_440053.p1 GENE.S_Transcript_440053~~S_Transcript_440053.p1 ORF type:internal len:135 (+),score=24.75,zf-RVT|PF13966.2|2.1e-19 S_Transcript_440053:3-404(+)
WNLFLRRLIRDREVEELVSLLGVLEGVVILDTEDRRVWTSDSSRTFNCASFLSCLQGHAGGSTFPIARLIWKAKAPLKVRAFVWTLALGRINTNDMRQRRRPQWCLSPDKCFMCHKSGETASHLFLHCPFVRSV

Click here to download the sequence:
Link to NCBI Protein BLAST