Transcript Information: S_Transcript_440215.p1


Annotated TAIR IDAT1G17680.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6076388-6082160 | Forward length=896
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6633125771988
Replicate 21.7236554341808
Replicate 31.0085871295719
Condition 2: 8 Hour
Replicate 11.666046118526
Replicate 21.3982405399829
Replicate 30.83265029706958
Condition 3: 24 Hour
Replicate 11.7066315227027
Replicate 21.4164882235217
Replicate 31.5763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_440215.p1 GENE.S_Transcript_440215~~S_Transcript_440215.p1 ORF type:internal len:128 (-),score=24.36,TPR_9|PF13371.2|4.4e-06,TPR_9|PF13371.2|1.6e-05,TPR_9|PF13371.2|3.6e+03,TPR_8|PF13181.2|1.5,TPR_8|PF13181.2|0.024,TPR_8|PF13181.2|0.17,TPR_8|PF13181.2|1e+02,TPR_19|PF14559.2|0.00036,TPR_19|PF14559.2|0.00064,TPR_19|PF14559.2|3.1e+03,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|0.0064,TPR_17|PF13431.2|1.4e+02,TPR_11|PF13414.2|2e-05,TPR_11|PF13414.2|1.1,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|1.3e+03,TPR_12|PF13424.2|29,TPR_12|PF13424.2|4.4e-05,TPR_12|PF13424.2|3.8e+02,TPR_16|PF13432.2|4.7e-06,TPR_16|PF13432.2|1.8e+02,TPR_16|PF13432.2|6.6e+03,TPR_2|PF07719.13|3.1,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|21,TPR_2|PF07719.13|1.6e+02,TPR_1|PF00515.24|1.2,TPR_1|PF00515.24|0.34,TPR_1|PF00515.24|78,TPR_1|PF00515.24|78 S_Transcript_440215:3-383(-)
GGGGCATTGAGTAGTGAAAATGAAATTGAAAAAAGAGAAGAAGGAAAAATTGATGAAGCTTGGCATTGCTTAAAAAAAGCGATTAGAGCTGATCCGGGTGATATCTCTCTTAGATATTATCATGCTTCAATTTATATGGAGACGGGAGATCACCTGAAAGCCGCTGAATCATATTATCAGATAGCTCAAATCTGTCCAGATAATGTCGATGCTTTACGGACTACAGCAATGCTGTACAAGAAATGTGGTGACTTTGAGCGGTCTGTTAGCATCTTGGAGAACTACGTTGAAAATCATCCTCCTGAAGCTGATCTAACTGTGGTCGAGATGTTGGCTTCATTATACATGGAAAACAATGAGCATATAAAAGCTCTTCATCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_440215.p1 GENE.S_Transcript_440215~~S_Transcript_440215.p1 ORF type:internal len:128 (-),score=24.36,TPR_9|PF13371.2|4.4e-06,TPR_9|PF13371.2|1.6e-05,TPR_9|PF13371.2|3.6e+03,TPR_8|PF13181.2|1.5,TPR_8|PF13181.2|0.024,TPR_8|PF13181.2|0.17,TPR_8|PF13181.2|1e+02,TPR_19|PF14559.2|0.00036,TPR_19|PF14559.2|0.00064,TPR_19|PF14559.2|3.1e+03,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|0.0064,TPR_17|PF13431.2|1.4e+02,TPR_11|PF13414.2|2e-05,TPR_11|PF13414.2|1.1,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|1.3e+03,TPR_12|PF13424.2|29,TPR_12|PF13424.2|4.4e-05,TPR_12|PF13424.2|3.8e+02,TPR_16|PF13432.2|4.7e-06,TPR_16|PF13432.2|1.8e+02,TPR_16|PF13432.2|6.6e+03,TPR_2|PF07719.13|3.1,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|21,TPR_2|PF07719.13|1.6e+02,TPR_1|PF00515.24|1.2,TPR_1|PF00515.24|0.34,TPR_1|PF00515.24|78,TPR_1|PF00515.24|78 S_Transcript_440215:3-383(-)
GALSSENEIEKREEGKIDEAWHCLKKAIRADPGDISLRYYHASIYMETGDHLKAAESYYQIAQICPDNVDALRTTAMLYKKCGDFERSVSILENYVENHPPEADLTVVEMLASLYMENNEHIKALHH

Click here to download the sequence:
Link to NCBI Protein BLAST