Transcript Information: S_Transcript_440489.p1


Annotated TAIR IDAT1G73590.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN1, ATPIN1
Annotation TypeOrtholog
Chromosome Positionchr1:27659772-27662876 | Forward length=622
E-Value1.9E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.703994777906
Replicate 22.5366308849549
Replicate 31.9724851426311
Condition 2: 8 Hour
Replicate 12.3378101684558
Replicate 23.1703421869131
Replicate 33.3626604510532
Condition 3: 24 Hour
Replicate 11.1097668083457
Replicate 21.6967559468923
Replicate 32.0905972635257


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_440489.p1 GENE.S_Transcript_440489~~S_Transcript_440489.p1 ORF type:3prime_partial len:374 (+),score=99.04,Mem_trans|PF03547.14|6.7e-106 S_Transcript_440489:383-1501(+)
ATGATTACTGGGACTGACTTGTACAATGTTCTAACAAAAGTGGTACCACTATATGTGGCAATGATCTTAGCATATGGGTCAGTAAAATGGTGGAAAATATTCAGCCCAGATCAATGTTCTGGGATCAACAGATTTGTGGCTCTTTTTGCAGTCCCATTGCTCTCATTCACCTTCATTGCAGCCAACAATCCTTATGCAATGAACTTCAAGTTCATAGCAGCTGATACTCTCCAAAAAGTGATTGTTCTTGTGGTCCTTTCTATATGGTCTAGGATCAGTTCTAGAGGGTCACTTGACTGGTCTATAACCCTTTTTTCACTCTCAACTTTACCCAACACTCTTGTTATGGGTATCCCTCTTTTAAAGGGTATGTATGGGGAGTATTCTGGTGGTTTAATGGTACAAATTGTGGTCCTTCAATGTATCATTTGGTACACTCTTATGTTGTTCTTGTTTGAGTATAGAGGTGCTAAACTCTTGATTTCTGAACAATTTCCTGATACTGCTGGCTCTATTATATCATTTAAGGTTGATTCTGATATCATTTCACTTGATGGGAAAGAGCCCTTGGAAACTCAAGCTGAGTTAGGTGATGATGGGAAACTTCATGTGACTGTTAGGAAATCTACTAGTTCTAGATCAGAAGCTTTTTCTAGACCTTCTCATGGGATTTCTATGACTCCTAGGCCTTCTAATTTAACCAATGCTGAGATTTATTCACTACAATCTTCAAGGAATCAAACCCCTAGAGGGTCTAGTTTTAATCACACTGATTTTTACTCCTTTGTGAATGGGAAAGGTGGTTTGAGTAGTGTTAGTCCCAGGACTTCAAATTATGGGAACAACATGGGTTTTGATGAGGAGAGTAATATGGGTGTTCCTGCATTTGGTGGGCCTAGAGGTGGTGGTGCTGGTGGGCCCCAACATGCTGCTAGTGGGTACCCTGCCCCACCTTCAGCTGGGATTTTCTCACCTGCTGCTGGGCCCACTGCTGCTAAGAAGAAAGGTGGTGGTGGTGGTGATGGTGGTGGAAAGGATCTTCATATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCTGAAGCTGGTTTGCATGTCTTTAGAGGTGGTGGTGCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_440489.p1 GENE.S_Transcript_440489~~S_Transcript_440489.p1 ORF type:3prime_partial len:374 (+),score=99.04,Mem_trans|PF03547.14|6.7e-106 S_Transcript_440489:383-1501(+)
MITGTDLYNVLTKVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFTFIAANNPYAMNFKFIAADTLQKVIVLVVLSIWSRISSRGSLDWSITLFSLSTLPNTLVMGIPLLKGMYGEYSGGLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIISFKVDSDIISLDGKEPLETQAELGDDGKLHVTVRKSTSSRSEAFSRPSHGISMTPRPSNLTNAEIYSLQSSRNQTPRGSSFNHTDFYSFVNGKGGLSSVSPRTSNYGNNMGFDEESNMGVPAFGGPRGGGAGGPQHAASGYPAPPSAGIFSPAAGPTAAKKKGGGGGDGGGKDLHMFVWSSSASPVSEAGLHVFRGGGAT

Click here to download the sequence:
Link to NCBI Protein BLAST