Transcript Information: S_Transcript_441448.p1


Annotated TAIR IDAT5G08240.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2651382-2652336 | Reverse length=258
E-Value5.7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1874155016562
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15017880505023
Replicate 20.15754822985723
Replicate 30.60044641140792
Condition 3: 24 Hour
Replicate 10.15383720768024
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_441448.p1 GENE.S_Transcript_441448~~S_Transcript_441448.p1 ORF type:5prime_partial len:142 (+),score=1.56 S_Transcript_441448:3-428(+)
GAAATCATACTTGATCACCTTGACATTGACCCGAATCGGGTAGACCAATCAGACGATAACACATGTCATAAACAAGGGTTTAAGTTCAAGTCCGAGGATAAAGACAGGCACGGGTTCGCTCCTTATAACAAGGCGAAAAAATGTTTATTGGCGTCTAAGGTGACTAAGGACTCATTGATTGGGGCTTCAATCATGGTATTAACGCTAATAATAATGTCAATTTGGGGAAGATTATGTGCCATTTTATGCATGTCCGCTTGGCTCTATTGCGTACCACTTTTAAGGGAAGCCAGAAAAATGAACTTTGAATCACATGAGAATTCCAAGCAATTGAAAATGAGCTCAGAATTGTACAATAAGAAGGTGGTGTTAGAAGGTCTTCTTCAAAGGAATCACAGGATTAATGCGAAAACTGGTATTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_441448.p1 GENE.S_Transcript_441448~~S_Transcript_441448.p1 ORF type:5prime_partial len:142 (+),score=1.56 S_Transcript_441448:3-428(+)
EIILDHLDIDPNRVDQSDDNTCHKQGFKFKSEDKDRHGFAPYNKAKKCLLASKVTKDSLIGASIMVLTLIIMSIWGRLCAILCMSAWLYCVPLLREARKMNFESHENSKQLKMSSELYNKKVVLEGLLQRNHRINAKTGIS*

Click here to download the sequence:
Link to NCBI Protein BLAST