Transcript Information: S_Transcript_441564.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_441564.p1 GENE.S_Transcript_441564~~S_Transcript_441564.p1 ORF type:5prime_partial len:152 (-),score=17.73 S_Transcript_441564:46-501(-)
CAACAATATCAACAAGTCAATGTGTTGGAAACCAACGACAGCGAAGATCAAATTTTCTACGCTTGTCAAGCTTCCACGACACAGAAGGATGAAGATGTTTGGCTCATTGATAGTGGTTGCACCAACCACATGACCAAAAATTCACAAATCTTTACTCGGCTTGACACGAGTGTCAAGACTCCAGTAAGGATTGGTAACGGAGCCTTAGTTGAATCTAGTAGAAAAGGCACAATTGCAGTTCAAACCAAAGGAGGCACCAAATACATCAAGGATGTCCTTTATGTACCAACACTGGATCAAAATTTGCTTAGTGTACCTCAAGTGATGCAACATGGATATACTATGCACTTTAAAGGTAACACCTGTGCAATTCTTGATTCCTACAAAAAGCAAATTGAACATGCAGTGATGCATAACAAATGCTTTCCAATCAAATGGAGGTTGAAAGAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_441564.p1 GENE.S_Transcript_441564~~S_Transcript_441564.p1 ORF type:5prime_partial len:152 (-),score=17.73 S_Transcript_441564:46-501(-)
QQYQQVNVLETNDSEDQIFYACQASTTQKDEDVWLIDSGCTNHMTKNSQIFTRLDTSVKTPVRIGNGALVESSRKGTIAVQTKGGTKYIKDVLYVPTLDQNLLSVPQVMQHGYTMHFKGNTCAILDSYKKQIEHAVMHNKCFPIKWRLKES*

Click here to download the sequence:
Link to NCBI Protein BLAST