Transcript Information: S_Transcript_441642.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21462097770307
Replicate 20
Replicate 30.14873174260968
Condition 2: 8 Hour
Replicate 10.17197895417043
Replicate 20.18041813419134
Replicate 30
Condition 3: 24 Hour
Replicate 10.35233683049345
Replicate 20.3655453480056
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_441642.p1 GENE.S_Transcript_441642~~S_Transcript_441642.p1 ORF type:internal len:124 (+),score=19.14,zf-RVT|PF13966.2|9.5e-07 S_Transcript_441642:2-370(+)
GTGGCCTTGGATCGGCTTAATACTCATGATGTTTTACAGCGCCGCTATCCGCGTTGGTGTATTTCTCCAGGGGTTTGTGTTATGTGTCGAAGGGAGAATGAGATTGTTTCTCATCTCTTTTTGACTTGTGATGTGGTGCAAGGTTTATGGTGTCGGCTCTTTGGGGTTAGGGCCGAGAATTGGGTTTGCCCCCCGACTGTTTCTCATCTTTTGTTGTGCCTTCATGTGGGCTTCGGCCTTCGAGTTAGGCAAGGATCAGAGCTTCTTGTGGCGTGGTGCTATGGGGGCTGTGCTTTGGAGTATTTGGTTAGAGAGGAATGCAAGGATTTTCCATGGGGTGATAACCCCCCTGCTTTTGTTTGGGATAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_441642.p1 GENE.S_Transcript_441642~~S_Transcript_441642.p1 ORF type:internal len:124 (+),score=19.14,zf-RVT|PF13966.2|9.5e-07 S_Transcript_441642:2-370(+)
VALDRLNTHDVLQRRYPRWCISPGVCVMCRRENEIVSHLFLTCDVVQGLWCRLFGVRAENWVCPPTVSHLLLCLHVGFGLRVRQGSELLVAWCYGGCALEYLVREECKDFPWGDNPPAFVWDR

Click here to download the sequence:
Link to NCBI Protein BLAST