Transcript Information: S_Transcript_44225.p1


Annotated TAIR IDAT2G44710.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18432902-18436629 | Forward length=809
E-Value1E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.185278980432
Replicate 226.898136608116
Replicate 326.871960174674
Condition 2: 8 Hour
Replicate 129.075807502875
Replicate 230.428670782007
Replicate 329.696637907821
Condition 3: 24 Hour
Replicate 130.962957106162
Replicate 226.108311573634
Replicate 327.194252723137


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44225.p1 GENE.S_Transcript_44225~~S_Transcript_44225.p1 ORF type:5prime_partial len:908 (+),score=238.83,RRM_1|PF00076.18|4e-16,RRM_1|PF00076.18|2.5e-10,RRM_1|PF00076.18|1.1e-10,RRM_6|PF14259.2|1.5e-10,RRM_6|PF14259.2|1.7e-08,RRM_6|PF14259.2|1.6e-07,RRM_5|PF13893.2|0.0048,RRM_5|PF13893.2|4.7e-05,RRM_5|PF13893.2|5.2e-05,Nup35_RRM_2|PF14605.2|0.0055,Nup35_RRM_2|PF14605.2|1.3e+02,Nup35_RRM_2|PF14605.2|0.59 S_Transcript_44225:3-2726(+)
ATAACGTCCATCGTTCTTCCTTTCTTCCGTCACCTGAGAAATAATAATACTATCACTTGCTCACCCCCATCGTCATCTTTTTCATTCGTCAGCTTTTCCTTCCCCAAAATCAAAATTCAATCTCACGCGCCACCGTCTGCGATGCCTCCCAAGACCTCCACGCGCACTAAACGCGCCCTCCGTTCCACCGCCCGTAAATCCGTCCCTTCCTCTCTCCCTACCTCCTTATCCTCACCTCATCCAAACGACGTCGCTTTACAAACCCTAACCGAAACCAATCAAAACGACGTCGTCGCTCAGAATGAATCTTCGCTTCTGCCGGCACCGGAAACCTCAACCGCTGTAGAAGAAGCTCCTGCGGCGAAGAACGACGTCGCTTCGGAGGCGGCACAGCCTCAATGCGAAACCGAAAGCGAAACCCTAAAGGAGGTGAGTAAAGAGAATGGGAATGAGAATAGTAATAATAGTAATGAAAATAAGCAGAAGAAGATGGTGAAGAAGACTGTCAAGGTTGTCAAGAAGGTGGTGAAGAGAGTTCCTAAAAGGGTTTTGAAAGGGGAACCTGAAACTGATTGTGGTAATAGTAATAGAGCTGATAACTTGGCAGCTAGTGATCAAGTGGAGGAGGGTTTGAAGGGGGGAACTGATCATAAAATTGGGAATTCGGATGTCAAGAAACCAAGTAATAGTGGTGATCAAATGAATGTGGAAAGTTTTAGTAGTAATTTGGATGATAAATCAGGGGGTAAGAAAGTGGAGGAGCAAATTAAGAAGATTGAATTTGATGAGAAAGAGAAAGAGAAAGGGAGTGAGTTGAAGGAAGTTGGTAATAGCGGTAAGGGGGTTGTGGAGGAGAGAGATGGGGAATGTAAGAAAGAAAACAGCGATAGAGATGGTCTTGAGAAGGAACAAGTTGATGAGAAAGAGAGCGACTCGATGGAAGTCGATAACAGTGGCAAGGGGGTTGTGGAGGAGAGAGGTGGTGAATGTGGGAAGGGATACGGCAAGAGAGATGGTGTTGAGAAGGAACAAGTTAAGAACATTGAAATTGATGAGAAAGAGAAGGAGAAAGGGAGTGAGTTGATGGAAGTGGATAATAGTGATAAAGGTGTAGTGGAGGAGAGAGACGGTGAATGTGGGATCAAAAACAATGTGAAAAATAGTGGTGAGAAGGAACAAGTTAAAAACATTGAAATTGATGAGAAAAAGAAAGGGTGTGAGTCGATGGAAGCTGATAATAGTGATAAGGGGGTTGTAGAGGAAAGAAATGTTGAATGTGCGAATGAAAACAACGAGAAAAGCGGTGGTGAGAAGGAAGGGAAGGCGGAAGATGAGGGAGGAGAAGGGAAGCTATTTAGAGGGGAATTGGAGGCAATGGAGCGGAGGAAGAAGAGGAAGACGGAAATATTTATTGGGGGTTTGGATAAGGATGCCAAGGATGAAGATGTTAGGAAGGTGTTTGCCGAAGTGGGTGAGATATTGGAATTGACAGTCGTCATGAATGCTCAGACAGGCAAGAATAAGGGGTTTGCTTTCTTAAGGTATGCATCTGCAGCTGATGCCAAAAAGGCCTTGGAGAAGTTTGCCAATGTTGAGGTTTGTGGAAAGCAGTGTCATGCATTGCCTGTTGAAGGCAATGATACAATATTTCTTGGTAATATTGACAAGAAATGGAAGGAAGAGGATGTTGTCAAACTGTTGCAGGAGATTGGCATTGAAAAGATAGATAAGGTCACAGTTATGATTGATCCAAACAAAAGTGGATGCAATCGTGGGTTTGCCTTCGTTGAATTTGAAACCAACAAGGATGCTCAAATTGCTTACAAGAAGCTCCAAAAGAAAGGTGTTTTTGGGAAGAATCGAAACATAAAGGTTGCTTGGGCTGAACCCTTGAAGGAGCTTGATGAAGAAGAAATGCTTAAGGTCAAAACAGTTTATGCCGAGTTCATTCCTTCATCTTGGGATGAAGAGAAAGTGAGAGATACCTTTAAGAAATTCGGGGACATAGATGATATTGTTCTTGCCCGAAATCTACGAACTACTAAGAGAAAAGACTTCGCCTTTATCAGCTACAAAACCCGAGAAGCTGCTATTGAATGCATTGAATCATTCAGTGATGAGCTAAGAGATGAGGATGGGACCAAGGTAAATGTGAAGGTCTCCCTTGCCAAACCCATGCAAAAGGATAAAAAACAGAAATCGGCCGTGAAACCTGTTCCAAAGGAAGTCCCGAATAAGAAGCCAAAAACCAGCCACGTCCATACAGGTAACTTGAGGCCAATTGATCCTAGAATCAGGGCACAACCAACTGTGCCTCATTATACTCTTCAAATGGCCGAGAGATCATCGACAAATGCAGAGCTGGTACATTTATTGAGGGAACAAGCTTCATGGAGGCCATCACATGCACCCCTGAGCAATCGTTCGGATATACATTACTCGACCTCCTTACCTGGTCGGAAACGCCCATTTTCTATGCTGGAGGCTGATCCATTATATCCAGATCCAAGCAGATATCCTTACTCCCACTTGGAAGCCTCATTTCCTGTTGCAAGCTCAAGTCACAATGTTGTCCGTCCTAGTGGTCTCACAAGTTCCTTGGCTTATCACCAGCAGCATCGTGGACATCCTTCAGGATCGTTCCATGGAGCCAGAAATTATTTGAGCAACGCCGAGAATAGAGATCAAGCATATGGCAGCAATTTTCTATATCGTAGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44225.p1 GENE.S_Transcript_44225~~S_Transcript_44225.p1 ORF type:5prime_partial len:908 (+),score=238.83,RRM_1|PF00076.18|4e-16,RRM_1|PF00076.18|2.5e-10,RRM_1|PF00076.18|1.1e-10,RRM_6|PF14259.2|1.5e-10,RRM_6|PF14259.2|1.7e-08,RRM_6|PF14259.2|1.6e-07,RRM_5|PF13893.2|0.0048,RRM_5|PF13893.2|4.7e-05,RRM_5|PF13893.2|5.2e-05,Nup35_RRM_2|PF14605.2|0.0055,Nup35_RRM_2|PF14605.2|1.3e+02,Nup35_RRM_2|PF14605.2|0.59 S_Transcript_44225:3-2726(+)
ITSIVLPFFRHLRNNNTITCSPPSSSFSFVSFSFPKIKIQSHAPPSAMPPKTSTRTKRALRSTARKSVPSSLPTSLSSPHPNDVALQTLTETNQNDVVAQNESSLLPAPETSTAVEEAPAAKNDVASEAAQPQCETESETLKEVSKENGNENSNNSNENKQKKMVKKTVKVVKKVVKRVPKRVLKGEPETDCGNSNRADNLAASDQVEEGLKGGTDHKIGNSDVKKPSNSGDQMNVESFSSNLDDKSGGKKVEEQIKKIEFDEKEKEKGSELKEVGNSGKGVVEERDGECKKENSDRDGLEKEQVDEKESDSMEVDNSGKGVVEERGGECGKGYGKRDGVEKEQVKNIEIDEKEKEKGSELMEVDNSDKGVVEERDGECGIKNNVKNSGEKEQVKNIEIDEKKKGCESMEADNSDKGVVEERNVECANENNEKSGGEKEGKAEDEGGEGKLFRGELEAMERRKKRKTEIFIGGLDKDAKDEDVRKVFAEVGEILELTVVMNAQTGKNKGFAFLRYASAADAKKALEKFANVEVCGKQCHALPVEGNDTIFLGNIDKKWKEEDVVKLLQEIGIEKIDKVTVMIDPNKSGCNRGFAFVEFETNKDAQIAYKKLQKKGVFGKNRNIKVAWAEPLKELDEEEMLKVKTVYAEFIPSSWDEEKVRDTFKKFGDIDDIVLARNLRTTKRKDFAFISYKTREAAIECIESFSDELRDEDGTKVNVKVSLAKPMQKDKKQKSAVKPVPKEVPNKKPKTSHVHTGNLRPIDPRIRAQPTVPHYTLQMAERSSTNAELVHLLREQASWRPSHAPLSNRSDIHYSTSLPGRKRPFSMLEADPLYPDPSRYPYSHLEASFPVASSSHNVVRPSGLTSSLAYHQQHRGHPSGSFHGARNYLSNAENRDQAYGSNFLYRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST