Transcript Information: S_Transcript_442445.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8567210164079
Replicate 21.0261762584891
Replicate 31.5726364102295
Condition 2: 8 Hour
Replicate 10.49593930970077
Replicate 21.0405510995222
Replicate 32.1481086733702
Condition 3: 24 Hour
Replicate 11.6934018209763
Replicate 21.229819232825
Replicate 31.9551972407067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_442445.p1 GENE.S_Transcript_442445~~S_Transcript_442445.p1 ORF type:5prime_partial len:129 (-),score=28.73,SAWADEE|PF16719.1|9.4e-06 S_Transcript_442445:49-435(-)
GCAGAGATGGAGAATCTATTCAGGGATGTAGGAAAGGATTCACTGAATCAGGAATTCTGTGAAGAACTTGCAACAAGTTTTAGTTCCTCCTTGTGTCGCGTTGGAAAACCAGCTATCAGCTGGCAACAGGTGCAAAGCTGGTTTCAAGAAAAACAAAAAGATTCATATGCATTGGACACCTGTACTCCAAGGAAAATGCCCGAGACTTCTATCATGCTTAAAGGTCGAACAGCAGCTGATGAACTCGCAGAATTGGCTTTTGAGGCCAAATCTTCAAGGGACAATGCATGGTATGATGTTGCTGCATTTCTTAACCATAGAGTTCTTAGTACTGGAGAACTTGTAAGCTCTTACTACATTGCTTCTCACATCTGCAACAATACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_442445.p1 GENE.S_Transcript_442445~~S_Transcript_442445.p1 ORF type:5prime_partial len:129 (-),score=28.73,SAWADEE|PF16719.1|9.4e-06 S_Transcript_442445:49-435(-)
AEMENLFRDVGKDSLNQEFCEELATSFSSSLCRVGKPAISWQQVQSWFQEKQKDSYALDTCTPRKMPETSIMLKGRTAADELAELAFEAKSSRDNAWYDVAAFLNHRVLSTGELVSSYYIASHICNNT*

Click here to download the sequence:
Link to NCBI Protein BLAST