Transcript Information: S_Transcript_442787.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value4.6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.22686585443759
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.23239237755951
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_442787.p1 GENE.S_Transcript_442787~~S_Transcript_442787.p1 ORF type:internal len:94 (+),score=9.86,Ank_4|PF13637.2|0.0092,Ank_4|PF13637.2|2.4e-09,Ank_4|PF13637.2|2.8e-05,Ank_5|PF13857.2|0.041,Ank_5|PF13857.2|7.5e-12,Ank_2|PF12796.3|2.4e-14,Ank|PF00023.26|0.018,Ank|PF00023.26|1.4e-07,Ank|PF00023.26|2e+03,Ank_3|PF13606.2|0.02,Ank_3|PF13606.2|0.00012,Ank_3|PF13606.2|1.3e+03 S_Transcript_442787:1-279(+)
AACCGCAATGCCGAAGGGTTCTACGCTCTACATTGTGCGTGCCGTCAGGGAGACTTGGTAGCTGTCCAGCTGTTGACCAGTAAGGACTACGATGTTAATGTTTCTGATGGGGATGGCTACACACCGCTGATGCTAGCAGCAAGAGAAGGCCATGCTCAGGTCTGTAAGCTCTTGATTTCACAAGGAGCTCGCTGTGATGTTAAAAACACCAGAGGTGAAACTGTGCTATCACTGGCCAGAAAGAAAGGCGGAAAGGAAAATGCTACCGAATGTGTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_442787.p1 GENE.S_Transcript_442787~~S_Transcript_442787.p1 ORF type:internal len:94 (+),score=9.86,Ank_4|PF13637.2|0.0092,Ank_4|PF13637.2|2.4e-09,Ank_4|PF13637.2|2.8e-05,Ank_5|PF13857.2|0.041,Ank_5|PF13857.2|7.5e-12,Ank_2|PF12796.3|2.4e-14,Ank|PF00023.26|0.018,Ank|PF00023.26|1.4e-07,Ank|PF00023.26|2e+03,Ank_3|PF13606.2|0.02,Ank_3|PF13606.2|0.00012,Ank_3|PF13606.2|1.3e+03 S_Transcript_442787:1-279(+)
NRNAEGFYALHCACRQGDLVAVQLLTSKDYDVNVSDGDGYTPLMLAAREGHAQVCKLLISQGARCDVKNTRGETVLSLARKKGGKENATECVI

Click here to download the sequence:
Link to NCBI Protein BLAST