Transcript Information: S_Transcript_443245.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.29618597662685
Replicate 20
Replicate 30.29605343895807
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_443245.p1 GENE.S_Transcript_443245~~S_Transcript_443245.p1 ORF type:internal len:144 (-),score=24.01,UBN2|PF14223.2|5.9e-35,UBN2_2|PF14227.2|4.2e-12 S_Transcript_443245:1-429(-)
CGAATCATCAATGCAACTTCCTCAAAACAAGTCTGGGATATTCTTAAGGAGGAGTTTCTAGACTCAAATAAGATTAGAGCCATTAAGCTTCAACATTTGAGAAGAGATTTCAGAGATTTAGAGATAATGGAATCCGAGTCCATAAAGGATTACTCATCTAGAATGATGGAGATCGTGAACCAGATGAAAATATATGGAAAGTCTATAAGCGATAAAAGGATTGTTGATAAGATCTTTTCCAGCCTTCAAGGAAAGTACAATTTTATCGTCAACGTTATAGAAGAACCCAAAGATCTTGATAAATTATCTCCTATGGAACTCTTTGGATCTCTTCAAGCACATGAATATAAAGTGACAAACAAAGATGAGGGGAAAACTGAAGGTGCCTTCCAAACAAAGCACAAAGAAAAGCGAAGAAATTTAAAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_443245.p1 GENE.S_Transcript_443245~~S_Transcript_443245.p1 ORF type:internal len:144 (-),score=24.01,UBN2|PF14223.2|5.9e-35,UBN2_2|PF14227.2|4.2e-12 S_Transcript_443245:1-429(-)
RIINATSSKQVWDILKEEFLDSNKIRAIKLQHLRRDFRDLEIMESESIKDYSSRMMEIVNQMKIYGKSISDKRIVDKIFSSLQGKYNFIVNVIEEPKDLDKLSPMELFGSLQAHEYKVTNKDEGKTEGAFQTKHKEKRRNLKK

Click here to download the sequence:
Link to NCBI Protein BLAST