Transcript Information: S_Transcript_44382.p1


Annotated TAIR IDAT4G16144.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 3
Annotated Gene Symbol(s)AMSH3
Annotation TypeOrtholog
Chromosome Positionchr4:9138053-9141422 | Reverse length=507
E-Value4.6E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.448016706778
Replicate 213.878206334566
Replicate 311.563892987903
Condition 2: 8 Hour
Replicate 115.17714270554
Replicate 215.290436872716
Replicate 315.256302217275
Condition 3: 24 Hour
Replicate 116.119409995076
Replicate 214.484734414722
Replicate 313.780592810053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44382.p1 GENE.S_Transcript_44382~~S_Transcript_44382.p1 ORF type:complete len:496 (+),score=86.34,JAB|PF01398.17|2.8e-18,USP8_dimer|PF08969.7|6.2e-09,Prok-JAB|PF14464.2|7e-06 S_Transcript_44382:370-1857(+)
ATGAGCCCTCCGGCAAAACCGATCAATGTCGCCGCTCTGTCTAGAAAGATCGATGTCGACAATCGCCTTTCTTTGGGCTATTATTATCGAATCGCTGACACCCTTCTTAAACAGGCCAATGTATATCGAGAGGAGAACAATATAGTGGATTTGTATTTTATGCTTGTCAGATATTCGAGTTTGGTGTCTGAAACAATACCATTTCATCGGGATTATCAGACTCTGCACACCGGAGAAAAGACTTATTACAAAAAGAAATTGCTTGCAGTGTTGGATGAGCTGGAATCTTTGAAGCCTGAGTTCTTGCGTCGAGTGGATCAGCTGAACAAAGCTTATAGAGAAGCACAGCAGAATCAACTTGATGTCCGAGAGACATCATCAAATGGCTCTGAAACATCTGTCGCCTGGCCTTCTGCTTATGCTCCTAGTTATGAAACTAAGCAGCTGCAACCAGTAAGCAAGAAATTTCAGTCCTCGTGGAGCCAGAGTAATGACTGTCAAGCTGTGCCTTTGGAGCAAAAGTTCTCCAAGCTGTCCTTTTCTGTACCACTTCCAAAGCAAGAAACGTTGTCAAGACACTCTTTTCTAGGCCCAAATGGACTACGGGGTCAATGGCAGAGACCAAGTGCCGGACTTAAGGTGAGCTATCCAAGTCACACCGAGTTGACATTAACAGAGGATCTGAGCCTTATTCAAGGAAGACAAGATGAAGTTCAGGCTCCAAAAGATGAAAATATAGGACAAGATATGGAAGCTGTCCTGTCTTTAGCTGATGGTAATTGGTCAAGTCCTGAGAATGATGCACCCCTGGACATTATCAGGCAGCCAATGCCACCTCCTGTTCTTGCTCAAGTGCACCCAGAAGTTCGCTCTATTTCCCCTTCCAGAGTTGCTGATCCACGACCTGGACCAGCCATGTGTCCAGAGGATGGGGTACGGAATGGCAATACATATCAACATTTGCATATTCCTGTGAGAATGATGGAAGATTTCTTGAGACTGGCTCAACAAAATACAGCAAAAAATCTGGAGACTTGTGGAGTTCTTGCAGGCTCATTGAAAAACCGGGTGTTTCACATCACTACCCTAATTGTTCCAAAGCAGGAGTCAACTTCTGATTCTTGCCAAACATTAAATGAGGAAGAAATATTTGAGGTTCAGGACAAATTGTCATTATTTCCTCTTGGATGGATCCATACGCACCCTACACAGACATGTTTCATGTCATCAGTTGACCTGCACACTCATTACTCGTATCAGATCATGTTACCAGAAGCAGTTGCAATTGTCATGGCTCCGACAGATTCATCCAGTCCACATGGGATTTTTCACTTATCCGACCCTGGAGGCATTTCTGTGATCCGAAACTGCCAACAGCGTGGGTTTCACCCCCATGAAGAGCCCTCAGATGGTAGCCCGCTATATGAGCACTGTTCACATGTTTATATGAACCCAAAATTGAAGTTTGATGTGGTTGATCTTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44382.p1 GENE.S_Transcript_44382~~S_Transcript_44382.p1 ORF type:complete len:496 (+),score=86.34,JAB|PF01398.17|2.8e-18,USP8_dimer|PF08969.7|6.2e-09,Prok-JAB|PF14464.2|7e-06 S_Transcript_44382:370-1857(+)
MSPPAKPINVAALSRKIDVDNRLSLGYYYRIADTLLKQANVYREENNIVDLYFMLVRYSSLVSETIPFHRDYQTLHTGEKTYYKKKLLAVLDELESLKPEFLRRVDQLNKAYREAQQNQLDVRETSSNGSETSVAWPSAYAPSYETKQLQPVSKKFQSSWSQSNDCQAVPLEQKFSKLSFSVPLPKQETLSRHSFLGPNGLRGQWQRPSAGLKVSYPSHTELTLTEDLSLIQGRQDEVQAPKDENIGQDMEAVLSLADGNWSSPENDAPLDIIRQPMPPPVLAQVHPEVRSISPSRVADPRPGPAMCPEDGVRNGNTYQHLHIPVRMMEDFLRLAQQNTAKNLETCGVLAGSLKNRVFHITTLIVPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPTQTCFMSSVDLHTHYSYQIMLPEAVAIVMAPTDSSSPHGIFHLSDPGGISVIRNCQQRGFHPHEEPSDGSPLYEHCSHVYMNPKLKFDVVDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST