Transcript Information: S_Transcript_444004.p1


Annotated TAIR IDAT1G08880.1
Annotated Gene NameHistone superfamily protein
Annotated Gene Symbol(s)HTA5, H2AXA, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:2847144-2847676 | Reverse length=142
E-Value5.2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5145610459046
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444004.p1 GENE.S_Transcript_444004~~S_Transcript_444004.p1 ORF type:internal len:123 (+),score=17.79,Histone|PF00125.20|2.3e-17,Histone_H2A_C|PF16211.1|3.4e+03,Histone_H2A_C|PF16211.1|1e-11 S_Transcript_444004:2-367(+)
AATAAACCAACTCTTCAAAAAACCAAAATGTCTCAAAAATCCAGCAAATCCCAAAAAGATAAGAAGGACCCAATCTCCAGATCCTACAGAGCAGGATTGCAATTCCCAGTTGGTAGAATCCACAGATTCTTGAGAGAAGGAAGATATGCAGACCGTATCGGAGCAGGAGCACCAGTCTACTTGACTGCAGTCCTCGAGTACCTTGCAGCTGAAATTCTCGAGTTGGCAGGAAATGCAGCAAGAGATAACAAGAAGACCAGAATCATCCCAAGACACATCCAACTTGCAGTCAGAAATGACGAAGAGTTGAACAAGCTTTTACAACATGTTACCATTGCAAACGGAGGAGTCATCCCATCCATCCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444004.p1 GENE.S_Transcript_444004~~S_Transcript_444004.p1 ORF type:internal len:123 (+),score=17.79,Histone|PF00125.20|2.3e-17,Histone_H2A_C|PF16211.1|3.4e+03,Histone_H2A_C|PF16211.1|1e-11 S_Transcript_444004:2-367(+)
NKPTLQKTKMSQKSSKSQKDKKDPISRSYRAGLQFPVGRIHRFLREGRYADRIGAGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLQHVTIANGGVIPSIH

Click here to download the sequence:
Link to NCBI Protein BLAST