Transcript Information: S_Transcript_444028.p1


Annotated TAIR IDAT3G49910.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18504311-18504751 | Forward length=146
E-Value1.4E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1143.46704219168
Replicate 2115.80164671305
Replicate 3109.53300110565
Condition 2: 8 Hour
Replicate 1112.03948719915
Replicate 296.755406299731
Replicate 3101.27732669169
Condition 3: 24 Hour
Replicate 170.635486210703
Replicate 287.549038627413
Replicate 383.604035515436


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444028.p1 GENE.S_Transcript_444028~~S_Transcript_444028.p1 ORF type:5prime_partial len:197 (+),score=30.44,Ribosomal_L26|PF16906.1|1.2e-38,KOW|PF00467.25|5.4e-09,KOW|PF00467.25|1.1e+04 S_Transcript_444028:1-591(+)
CCCTCTTTTCACAACCCCCCTCACTCGGCTCCTCTCCCCTATATCGCCGTTTATCTCTCTCTTCAAAACCCTAACCCCCTTCCATTTCCAGAAAAAAGAGAGAGAGAGGAGAGAGAAAAAAGCTTGAGAAAAATGAAGTACAACCCAAGAGTATCAAGCTCGAGGCGCAAGTCCCGGAAGGCCCACTTCACGGCGCCATCAAGCGTGCGTCGTGTGATAATGAGCGCCCCACTCTCCGGCGACCTCCGCAACAAGTACCATGTCCGTTCTATCCCCGTCCGTAAGGACGATGAAGTCCAGGTGGTTCGTGGGACCTTCAAGGGTCGTGAGGGCAAAGTCGTCCAATGCTACCGTAAGAAGTGGGTCATCCATATTGAGCGTATTACCCGGGAGAAGGTTAATGGGACTACCGTCAATGTGGGGATTCACCCGTCCAAGGTTGTGGTGACTAAGCTCAAGCTTGACAAGGATAGGAAAGCTCTCTTGGACCGTAAGGCTAAGGGCCGTGGTGCTGATAAGGGTAAGGGCAAGTTCACTGTTGAGGATGTCGCTGCTGCTGCTGGTGGCCCCTCTCTTCAGGAGATTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444028.p1 GENE.S_Transcript_444028~~S_Transcript_444028.p1 ORF type:5prime_partial len:197 (+),score=30.44,Ribosomal_L26|PF16906.1|1.2e-38,KOW|PF00467.25|5.4e-09,KOW|PF00467.25|1.1e+04 S_Transcript_444028:1-591(+)
PSFHNPPHSAPLPYIAVYLSLQNPNPLPFPEKREREEREKSLRKMKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRNKYHVRSIPVRKDDEVQVVRGTFKGREGKVVQCYRKKWVIHIERITREKVNGTTVNVGIHPSKVVVTKLKLDKDRKALLDRKAKGRGADKGKGKFTVEDVAAAAGGPSLQEID*

Click here to download the sequence:
Link to NCBI Protein BLAST