Transcript Information: S_Transcript_444180.p1


Annotated TAIR IDAT1G21700.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3C
Annotated Gene Symbol(s)ATSWI3C, CHB4, SWI3C
Annotation TypeOrtholog
Chromosome Positionchr1:7620156-7623978 | Reverse length=807
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20.26265225663708
Replicate 30
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 21.0653261257013
Replicate 30.25376009053549
Condition 3: 24 Hour
Replicate 10.78017441037836
Replicate 20.80942184201241
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444180.p1 GENE.S_Transcript_444180~~S_Transcript_444180.p1 ORF type:3prime_partial len:84 (+),score=20.01,SWIRM-assoc_1|PF16495.1|4.8e-08 S_Transcript_444180:1770-2018(+)
ATGGCTGGAAATCCGAAATTCCTGTCAAATTATGATTCATCTCCAGTTCCATTGTTATTTCATGTTGGCTGCAAACAAATGGTCCCCGACTCTGAGCTTAGTACACTTTGCATTTGGTCAAAGTTTCTGATGATCCCTCGTTTATGGCTTAATTTTGCTCTGCAACAGCTTAAGAGATTGGAGCTGAAGCTGAAACAATTTGCAGAAGTCGAGACATTGTTGATGAAGGAATGTGAACAAGTGGAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444180.p1 GENE.S_Transcript_444180~~S_Transcript_444180.p1 ORF type:3prime_partial len:84 (+),score=20.01,SWIRM-assoc_1|PF16495.1|4.8e-08 S_Transcript_444180:1770-2018(+)
MAGNPKFLSNYDSSPVPLLFHVGCKQMVPDSELSTLCIWSKFLMIPRLWLNFALQQLKRLELKLKQFAEVETLLMKECEQVEK

Click here to download the sequence:
Link to NCBI Protein BLAST