Transcript Information: S_Transcript_44429.p1


Annotated TAIR IDAT1G14900.1
Annotated Gene Namehigh mobility group A
Annotated Gene Symbol(s)HMGA
Annotation TypeOrtholog
Chromosome Positionchr1:5138665-5139353 | Reverse length=204
E-Value1.3E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.257723148868
Replicate 220.501743126559
Replicate 321.226545303767
Condition 2: 8 Hour
Replicate 132.59163425826
Replicate 241.36681446591
Replicate 338.408744269353
Condition 3: 24 Hour
Replicate 116.589746424461
Replicate 220.09809705827
Replicate 320.10625237955


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44429.p1 GENE.S_Transcript_44429~~S_Transcript_44429.p1 ORF type:5prime_partial len:212 (+),score=45.30,Linker_histone|PF00538.15|9.9e-11 S_Transcript_44429:1-636(+)
CTCTCTCTTTCTCTTACACTTTGTGGGGTCTCTTTTTTTCTCTCCTTTCTCTCTCCTAAAGATCATAAAAAAAAAACCACCAAAAAAAAAAAAAAAACTTCAATGGCAACTGAAGAGGTGAATAGACATCACTCTCTCCCTCCCTATCCTGAGATGATCATGACTGCAATAGATGCTTTAAACGAGAAAATGGGTTCAAACAAGACCTCAATTTCCAAATACATCGAATCAAAGTACCAGAACCTGCCAGCAGGCCACTCGACACTGCTAAGACACCACTTGAACAGGATGAAAGACACCGGGGAGTTGATTTTCTGGAAGAATAATTACATGAAACCTGACCCTAATTTCATCCGACGTGGACGTGGAAGGCCCCCCAAGAACAAGGAGCCTGGGATGCTGACTTCTAGCCCACCTGGTCCTGCTAGGCCAAGGGGGCGGCCCAGGAAGGATGAATATGGTCCCGGTGATGCTCCTGGGGATGCTGATGGTGTTCCTATGAAGAAGAAGAAAGCATTAGCCTCGGAGAACAACTATGGCATTGATGGTGGATCAGGCCCTGCACCCACAAAAACCGGAAGGCCTAGGGGAAGGCCTCCAAAGGCCAAGCCTCAAACAGCATTGGAAGGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44429.p1 GENE.S_Transcript_44429~~S_Transcript_44429.p1 ORF type:5prime_partial len:212 (+),score=45.30,Linker_histone|PF00538.15|9.9e-11 S_Transcript_44429:1-636(+)
LSLSLTLCGVSFFLSFLSPKDHKKKTTKKKKKTSMATEEVNRHHSLPPYPEMIMTAIDALNEKMGSNKTSISKYIESKYQNLPAGHSTLLRHHLNRMKDTGELIFWKNNYMKPDPNFIRRGRGRPPKNKEPGMLTSSPPGPARPRGRPRKDEYGPGDAPGDADGVPMKKKKALASENNYGIDGGSGPAPTKTGRPRGRPPKAKPQTALEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST