Transcript Information: S_Transcript_444357.p1


Annotated TAIR IDAT1G18210.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6268273-6268785 | Reverse length=170
E-Value9.3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85503618426283
Replicate 21.4176892888363
Replicate 30.22220163956145
Condition 2: 8 Hour
Replicate 10.68515310255849
Replicate 20.80862103517084
Replicate 30.59924069572237
Condition 3: 24 Hour
Replicate 10.78957410206967
Replicate 20.54611594159873
Replicate 30.91164015922106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444357.p1 GENE.S_Transcript_444357~~S_Transcript_444357.p1 ORF type:5prime_partial len:249 (+),score=12.84,EF-hand_1|PF00036.28|3.9e-07,EF-hand_1|PF00036.28|4.3e-07,EF-hand_1|PF00036.28|2.7e-06,EF-hand_1|PF00036.28|3.8e-07,EF-hand_6|PF13405.2|7.7e-07,EF-hand_6|PF13405.2|0.033,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.0098,EF-hand_7|PF13499.2|1.1e-12,EF-hand_7|PF13499.2|7.6e-10,EF-hand_5|PF13202.2|3.3e-07,EF-hand_5|PF13202.2|0.005,EF-hand_5|PF13202.2|1.7e+03,EF-hand_5|PF13202.2|0.0033,EF-hand_5|PF13202.2|2.5e-05,EF-hand_8|PF13833.2|0.021,EF-hand_8|PF13833.2|0.00025,EF-hand_8|PF13833.2|1.4e-07,SPARC_Ca_bdg|PF10591.5|2.7e-05,SPARC_Ca_bdg|PF10591.5|0.0025,EF-hand_9|PF14658.2|0.0032,EF-hand_9|PF14658.2|5.5,EF-hand_4|PF12763.3|0.0062,EF-hand_4|PF12763.3|1.8 S_Transcript_444357:1-747(+)
AAGGAAAGAAGAACCTTCATAGTGAGGCGAAATCAAAACCGCGTTGCTTTCGTAATTAATGCCACGCGTCTTCTTCCCATTAAAAATCCAAACCTCCAAATTCTCAACCCTGCTTTTCTCCCTCTCTCTATTTCTCTCTCTTCAAAAAGAATCTCCTCACAAATCCCTAACTCTTTCTCTCTCCTCTCTCTCTCTCTAACCTTCAAGCCTTCAACAATGGCAACAGTCGAGAACCAGGCCAATGGAAGCAGCCATAACAGCAGCAACTCATCACGATCTCGCAACACGATGTACCTCTCGGACCTAACGGAAGTCAAGAAAGTGTTCGACCGTTTCGACACTAACGGCGACGGGAAGATCTCCGGCTCGGAGCTCGCCGGCGTGTTAACGGCGTTAGGATCGGAGACGAATCAAGAGGAAGTAGACCGAATGATGGAGGAGATGGACTCGGACAAGGACGGATTCGTGAACCTGGAGGAGTTCGCCGAGTTCTGTAGCCGGAAAGTTGACGACGACGAGTCAGGGTCGAGAGAGCTCCGTGACGCGTTCGAGATGTACGATCAGGACAAGAACGGACTGATTTCGGCGTCCGAGTTGCACCTGGTGCTAAGTCGACTCCGTGAGAGGTGTACGGTCGAAGATTGTGGGAGGATGATCCAGTCTGTTGACGCTGATGGTGATGGTAATGTAAGTTTTGAGGAGTTTCGCAAGATGATGACTACTCCCAAAACGACGTCGTCTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444357.p1 GENE.S_Transcript_444357~~S_Transcript_444357.p1 ORF type:5prime_partial len:249 (+),score=12.84,EF-hand_1|PF00036.28|3.9e-07,EF-hand_1|PF00036.28|4.3e-07,EF-hand_1|PF00036.28|2.7e-06,EF-hand_1|PF00036.28|3.8e-07,EF-hand_6|PF13405.2|7.7e-07,EF-hand_6|PF13405.2|0.033,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.0098,EF-hand_7|PF13499.2|1.1e-12,EF-hand_7|PF13499.2|7.6e-10,EF-hand_5|PF13202.2|3.3e-07,EF-hand_5|PF13202.2|0.005,EF-hand_5|PF13202.2|1.7e+03,EF-hand_5|PF13202.2|0.0033,EF-hand_5|PF13202.2|2.5e-05,EF-hand_8|PF13833.2|0.021,EF-hand_8|PF13833.2|0.00025,EF-hand_8|PF13833.2|1.4e-07,SPARC_Ca_bdg|PF10591.5|2.7e-05,SPARC_Ca_bdg|PF10591.5|0.0025,EF-hand_9|PF14658.2|0.0032,EF-hand_9|PF14658.2|5.5,EF-hand_4|PF12763.3|0.0062,EF-hand_4|PF12763.3|1.8 S_Transcript_444357:1-747(+)
KERRTFIVRRNQNRVAFVINATRLLPIKNPNLQILNPAFLPLSISLSSKRISSQIPNSFSLLSLSLTFKPSTMATVENQANGSSHNSSNSSRSRNTMYLSDLTEVKKVFDRFDTNGDGKISGSELAGVLTALGSETNQEEVDRMMEEMDSDKDGFVNLEEFAEFCSRKVDDDESGSRELRDAFEMYDQDKNGLISASELHLVLSRLRERCTVEDCGRMIQSVDADGDGNVSFEEFRKMMTTPKTTSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST