Transcript Information: S_Transcript_444359.p1


Annotated TAIR IDAT1G18210.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6268273-6268785 | Reverse length=170
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46895156361551
Replicate 20.29157871661914
Replicate 30.2437366002238
Condition 2: 8 Hour
Replicate 10
Replicate 20.3942175971758
Replicate 31.0329265359242
Condition 3: 24 Hour
Replicate 10.19246593383783
Replicate 20.099840579631486
Replicate 30.11111032777584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444359.p1 GENE.S_Transcript_444359~~S_Transcript_444359.p1 ORF type:complete len:227 (+),score=12.58,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|3.8e-07,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|5.5e-07,EF-hand_6|PF13405.2|6.7e-07,EF-hand_6|PF13405.2|0.029,EF-hand_6|PF13405.2|1.6e-06,EF-hand_6|PF13405.2|0.0086,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|5.4e-10,EF-hand_5|PF13202.2|2.9e-07,EF-hand_5|PF13202.2|0.0045,EF-hand_5|PF13202.2|1.5e+03,EF-hand_5|PF13202.2|0.0029,EF-hand_5|PF13202.2|4.3e-05,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|0.00023,EF-hand_8|PF13833.2|9.7e-08,SPARC_Ca_bdg|PF10591.5|3e-05,SPARC_Ca_bdg|PF10591.5|0.0033,EF-hand_9|PF14658.2|0.0027,EF-hand_9|PF14658.2|0.98,EF-hand_4|PF12763.3|6.4e+02,EF-hand_4|PF12763.3|0.0057,EF-hand_4|PF12763.3|3.5 S_Transcript_444359:59-739(+)
ATGCCACGCGTCTTCTTCCCATTAAAAATCCAAACCTCCAAATTCTCAATCTCAACCCACCTCCTTTTCTCTCTCTTTATTTCTCCCTCTTCAAAAAAAATCTCCTCACAAATCCCAAACCCTTTCTCTCTAACCTTCAAGTCTTCAACAATGGCGACAGTAGAGAACCAGGCCAACGGAAGCAGCCACAACAGCAGCAACTCATCACGATCTCGCAACCCAATGTACCTCTCGGACCTAACAGAAGTCAAGAAAGTGTTCGACCGTTTCGACACTAACGGCGACGGGAAGATCTCCGGCTCGGAGCTCGCCGGCGTGTTAACGGCGTTAGGATCGGAGACGAATCAAGAGGAAGTAGACCGAATGATGGAGGAGATGGACTCGGACAAGGACGGATTCGTGAACCTGGAGGAGTTCGCCGAGTTCTGTAGCCGGAAAGTTGACGACGACGAGTCAGGGTCGAGAGAGCTCCGTGACGCGTTCGAGATGTACGATCAGGACAAGAACGGACTGATTTCGGCGTCCGAGTTGCACCTGGTGCTAAGTCGACTCCGTGAGAGGTGTACGGTCGAAGATTGTGGAAGGATGATCCAGTCTGTTGATGCTGATGGTGATGGTAATGTCAGTTTCGATGAGTTTCGCAAGATGATGACTAACCCCAAAACGACGTCGTCGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444359.p1 GENE.S_Transcript_444359~~S_Transcript_444359.p1 ORF type:complete len:227 (+),score=12.58,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|3.8e-07,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|5.5e-07,EF-hand_6|PF13405.2|6.7e-07,EF-hand_6|PF13405.2|0.029,EF-hand_6|PF13405.2|1.6e-06,EF-hand_6|PF13405.2|0.0086,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|5.4e-10,EF-hand_5|PF13202.2|2.9e-07,EF-hand_5|PF13202.2|0.0045,EF-hand_5|PF13202.2|1.5e+03,EF-hand_5|PF13202.2|0.0029,EF-hand_5|PF13202.2|4.3e-05,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|0.00023,EF-hand_8|PF13833.2|9.7e-08,SPARC_Ca_bdg|PF10591.5|3e-05,SPARC_Ca_bdg|PF10591.5|0.0033,EF-hand_9|PF14658.2|0.0027,EF-hand_9|PF14658.2|0.98,EF-hand_4|PF12763.3|6.4e+02,EF-hand_4|PF12763.3|0.0057,EF-hand_4|PF12763.3|3.5 S_Transcript_444359:59-739(+)
MPRVFFPLKIQTSKFSISTHLLFSLFISPSSKKISSQIPNPFSLTFKSSTMATVENQANGSSHNSSNSSRSRNPMYLSDLTEVKKVFDRFDTNGDGKISGSELAGVLTALGSETNQEEVDRMMEEMDSDKDGFVNLEEFAEFCSRKVDDDESGSRELRDAFEMYDQDKNGLISASELHLVLSRLRERCTVEDCGRMIQSVDADGDGNVSFDEFRKMMTNPKTTSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST