Transcript Information: S_Transcript_44444.p1


Annotated TAIR IDAT1G21880.2
Annotated Gene Namelysm domain GPI-anchored protein 1 precursor
Annotated Gene Symbol(s)LYM1
Annotation TypeOrtholog
Chromosome Positionchr1:7680689-7682526 | Forward length=416
E-Value5E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.296257719286
Replicate 212.268560548338
Replicate 39.738454100219
Condition 2: 8 Hour
Replicate 19.8654843055896
Replicate 29.1996386929717
Replicate 311.255564389546
Condition 3: 24 Hour
Replicate 15.5122603200565
Replicate 28.1547359410222
Replicate 39.6645216879417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44444.p1 GENE.S_Transcript_44444~~S_Transcript_44444.p1 ORF type:complete len:428 (+),score=76.92,LysM|PF01476.16|1.8e+03,LysM|PF01476.16|2.4e-06,LysM|PF01476.16|6.5e-09 S_Transcript_44444:495-1778(+)
ATGCTAAACCCAAAACCCACTTCAAAGTTTCCACCTTTAACCTTCATCTTGTTCCAAATCTTGTCAATTCTTACCCGTGTGAGCTCAAAATCCACCATTGAACCTTGTTCTAACTCTGACTCTTGCAATGCTATGTTCGGCTACACTCTCTACACTGACCTCAAAGTATCTGAGGTAGCATCTCTCTTTGGAATTGACCCAATTGCCCTCCTTACAGCTAATGCCATTGACATTTCTTACCCAGATGTTGAAAACCACATCTTACCATCTCAGCTCTTTGTTAAGGTCCCTATAAGCTGTTCTTGTGTTGATGGTATTAGGAAATCAGTGTCTACCCACTACAAGACTAGGCCTTCTGACACTCTTGCTTCAATTGCTGAGTCAATTTATGGGGGTTTAGTTTCTGCTGACCAGCTTAGAGAGGCTAATTCCATTTCTGACCCTTCTGCTCTTGATGTTGGGCAGTCATTAGTTGTGCCTTTGCCTTGTACTTGTTTTAATAACACTGATAACTTGTTGCCAGCTATATACTTGTCCTATGTTGTTCAGCCTGTTGATACTTTGGCTGGGATTGCTGGGAGATATCGGACTACTATTACTGATTTGATGAATGTTAATTCTCTTGGGAGTACTGCAATTGCTCCTGGTGATATCATTTCTGTTCCATTGTCAGCCTGTGCATCAAAATTCCCCACATTTGCCTCTGATTATGGTTTGATTGTTCCAAATGGAAGCTATGCGATCACTGCAAGTCATTGCGTACAATGCAGCTGTGGTCCAGGTAGTCGCAATTTGTATTGCATGCCAGCAACGCTGGCAGTATCTTGCTCCAGCATGCAATGCCGAGGCAGCAACCTGATGCTCGGGAATATAACCATGCAGCCAAGCAGCGCCGGTTGCAGTGTTACTTCTTGTAGTTATGGTGGTTACATGAATGGCACAATAATGACAATGTTCTCCACAGCCCTCCAACCTCGTTGCCCAGGGGCTGTGCAATTTCCAGCAGTAATTCCACCACCTACTACTGCTACCCGAGCATCTATGTTCGCTCCAGCCCCAGCACCATCATCTGCCAGATCAAGAGGACCCGGAGGAGCTACATTTCCCAGATCCACAGGCGCAGCTCTTCCCCCAATGGGTTCATTTCCTGCTAGTGGTCCAGCTGCTAGCACAGCTGGGAGTTTCACATCAGGTTGCTCTTTGGTGACCCCGTTCACCACTTCCCAGTTGATTGTTGCTCTATATGCTCTTGTTGTATGCCTGGTTGCTAGCAACGCTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44444.p1 GENE.S_Transcript_44444~~S_Transcript_44444.p1 ORF type:complete len:428 (+),score=76.92,LysM|PF01476.16|1.8e+03,LysM|PF01476.16|2.4e-06,LysM|PF01476.16|6.5e-09 S_Transcript_44444:495-1778(+)
MLNPKPTSKFPPLTFILFQILSILTRVSSKSTIEPCSNSDSCNAMFGYTLYTDLKVSEVASLFGIDPIALLTANAIDISYPDVENHILPSQLFVKVPISCSCVDGIRKSVSTHYKTRPSDTLASIAESIYGGLVSADQLREANSISDPSALDVGQSLVVPLPCTCFNNTDNLLPAIYLSYVVQPVDTLAGIAGRYRTTITDLMNVNSLGSTAIAPGDIISVPLSACASKFPTFASDYGLIVPNGSYAITASHCVQCSCGPGSRNLYCMPATLAVSCSSMQCRGSNLMLGNITMQPSSAGCSVTSCSYGGYMNGTIMTMFSTALQPRCPGAVQFPAVIPPPTTATRASMFAPAPAPSSARSRGPGGATFPRSTGAALPPMGSFPASGPAASTAGSFTSGCSLVTPFTTSQLIVALYALVVCLVASNAV*

Click here to download the sequence:
Link to NCBI Protein BLAST