Transcript Information: S_Transcript_444651.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17394118454366
Replicate 20.43260371681402
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16484996343213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444651.p1 GENE.S_Transcript_444651~~S_Transcript_444651.p1 ORF type:internal len:153 (+),score=10.11,Rubis-subs-bind|PF09273.7|5.4e-11 S_Transcript_444651:3-458(+)
ACTTATTTCTCATACAATGCCACCCGAGCTTACACTGCCGGTGAACAATTACTTGTTAATTATGGCCGAAAATCAAACTACGAATTGATGTTTAACTATGGCTTTGCTCTTGAGAATAATGCTGATGATGCCTTGACTTTACATTTTGGATTGAAAGCCAGCAATTTAGTTCAAAGCATTGTTGAACCTTTATTACGAGCTGTTGACCCTACCTACAAAGACATTCGAATTTTCCCCAATCGAGTGCCCCTCGCTTTACTCAGAGTGTTCCGATTATCAGTTATGGAGTTTTCTGAACTCGAAGTTGTCGCTGATGCGTTACAAGGAAAACCTGTTTCTTTAATTAATGAATTACGAGCTTACCGATCCGCCATTAACTCTTTGAGCACTTTATACAGATCCTACCAAACTACTGTTGAGGAGGATGCTGAATTATTGAAAACCAATTTATCCCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444651.p1 GENE.S_Transcript_444651~~S_Transcript_444651.p1 ORF type:internal len:153 (+),score=10.11,Rubis-subs-bind|PF09273.7|5.4e-11 S_Transcript_444651:3-458(+)
TYFSYNATRAYTAGEQLLVNYGRKSNYELMFNYGFALENNADDALTLHFGLKASNLVQSIVEPLLRAVDPTYKDIRIFPNRVPLALLRVFRLSVMEFSELEVVADALQGKPVSLINELRAYRSAINSLSTLYRSYQTTVEEDAELLKTNLSP

Click here to download the sequence:
Link to NCBI Protein BLAST