Transcript Information: S_Transcript_444918.p1


Annotated TAIR IDAT2G33160.1
Annotated Gene Nameglycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14053404-14056246 | Forward length=664
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36962501715528
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14809298831342
Replicate 20.62144023999241
Replicate 30.29605343895807
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_444918.p1 GENE.S_Transcript_444918~~S_Transcript_444918.p1 ORF type:internal len:144 (+),score=19.95,RVT_3|PF13456.2|2.1e-12 S_Transcript_444918:2-430(+)
GTTAGCTCTTGGTCGGGGCCTGTTAACAACACAATTAAAATCAATACAGATGCTGCTTTTGTCCATGGTTCTTGTGCAGGTATCGCTAGTGTTGCCAGAGATAAGCAGGGGAAATGGTTGTGGGCTTTCCAAGGGAAAGTTGCTTGTCATAGCCCTCTCATGGCTGAGATTTTCGCAATCAAGGAAGCCCTCAACCAATGCAGGAAGAAGAACATCCTCGATGCGGAAATTGCCTCAGATTGCAATCAGGCCATTGAGCTCCTTAATGGTCTCAGTCACCCAAGATCTCTTGTTTCTTATCTAGTTGCAGAATGCAGGGTACTGAGCAATGGGATGCCTATGACCCGGATGACTCGGGAAGCCAGGCAAGCTAACACGGTGGCAGATAGGCTAGCAAAGGATGCGAAGAACCTACGTTGCACAGAAACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_444918.p1 GENE.S_Transcript_444918~~S_Transcript_444918.p1 ORF type:internal len:144 (+),score=19.95,RVT_3|PF13456.2|2.1e-12 S_Transcript_444918:2-430(+)
VSSWSGPVNNTIKINTDAAFVHGSCAGIASVARDKQGKWLWAFQGKVACHSPLMAEIFAIKEALNQCRKKNILDAEIASDCNQAIELLNGLSHPRSLVSYLVAECRVLSNGMPMTRMTREARQANTVADRLAKDAKNLRCTET

Click here to download the sequence:
Link to NCBI Protein BLAST