Transcript Information: S_Transcript_445411.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20.50142703539806
Replicate 30.10478827320228
Condition 2: 8 Hour
Replicate 10.72700194262953
Replicate 20.12711277636208
Replicate 30.60556385241424
Condition 3: 24 Hour
Replicate 10.12411865619656
Replicate 20
Replicate 30.14330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_445411.p1 GENE.S_Transcript_445411~~S_Transcript_445411.p1 ORF type:complete len:176 (+),score=15.87,zf-RVT|PF13966.2|4e-10,zf-RVT|PF13966.2|3.6e+02 S_Transcript_445411:427-954(+)
ATGGTTTGGAGAAATTTTGCTAGACCTAGAGCTAAAGTTATCTTCTGGCTTGGTATGTTACAGAGACTAATGACAAAAGATAGAGTATGCAAATGGGATCCTAACTGTGATCCTATCTATATTTTAGGCAAGAAGGATCCAGAGACAAATGAGCACCTACTGGTTCACTGCTCTTACAACCAGAACATTATATCTAAATCAGTCCAGAAAATGAACACACAGTGGCAACAACCAGGTACTTGGCAACAATTGCTGGAGCAATGCAAGAGTATATGTAAAGGGAAGAAGCTTGTAGCTAAATGTGCTAAAACTATACTAGCAGAGGCTATTTATGCAATTCGGTGGGAAAGAAACCAGAGGATCTTCAAACAACAAGAAAGAACTGCTGATCAGATCAGTAAAGATACTATATACCTGATGAGTATGAGTGATCTGTTGCCTGGATCTTACTTGGAATTTGCGGAGCAAGAACCCAAGGTGTCGTTCTTTACTTGGGAATGCGGTTACGTCGCGAGGCAAAAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_445411.p1 GENE.S_Transcript_445411~~S_Transcript_445411.p1 ORF type:complete len:176 (+),score=15.87,zf-RVT|PF13966.2|4e-10,zf-RVT|PF13966.2|3.6e+02 S_Transcript_445411:427-954(+)
MVWRNFARPRAKVIFWLGMLQRLMTKDRVCKWDPNCDPIYILGKKDPETNEHLLVHCSYNQNIISKSVQKMNTQWQQPGTWQQLLEQCKSICKGKKLVAKCAKTILAEAIYAIRWERNQRIFKQQERTADQISKDTIYLMSMSDLLPGSYLEFAEQEPKVSFFTWECGYVARQKS*

Click here to download the sequence:
Link to NCBI Protein BLAST