Transcript Information: S_Transcript_445465.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16427778540235
Replicate 20.27238011799401
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.26968991963696
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_445465.p1 GENE.S_Transcript_445465~~S_Transcript_445465.p1 ORF type:5prime_partial len:162 (+),score=25.18,zf-RVT|PF13966.2|1.5e-11 S_Transcript_445465:1-486(+)
CCCAAACCAGAGCTTGGGATCTTCAAGGCCCCACACGACAGGGAAGTAAAGGAGCTTATGGTGCTGCTTGGTGTTTTGGAAAGGGTACATTTATCTAATGAGCCTGACTCCAGGAGGTGGCTTGGAGATTCAACAGGGGAGTTCTCGTGCAAGTTCTTCCTTAAGAATTTGGGTACAAATCATCCGGCTTTTCCATTGCCTAGTATTTTTAAGGCAAGGGTTCCAAAGAAGGTCCAGGCTTTTGTTTGGACACTTGTGTTAAACAAAATTCACACAAATGATGTGCTACAAAGGCTACGCCCCAACACAGCTTTGTCGCCAGGTATTTGTGTGATGTGTGGACGTGATAATGAGACGGAAGCCCATCTATTCTTATATTGCACTCTTACTAGTGGGATAGGAAGTTTGGGGTCTTCAGAGAATCTTGGGTGTGCCCGTCCTCTGTCATGGAGTTCCTACAGATTCACTTTAGGGGATTTGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_445465.p1 GENE.S_Transcript_445465~~S_Transcript_445465.p1 ORF type:5prime_partial len:162 (+),score=25.18,zf-RVT|PF13966.2|1.5e-11 S_Transcript_445465:1-486(+)
PKPELGIFKAPHDREVKELMVLLGVLERVHLSNEPDSRRWLGDSTGEFSCKFFLKNLGTNHPAFPLPSIFKARVPKKVQAFVWTLVLNKIHTNDVLQRLRPNTALSPGICVMCGRDNETEAHLFLYCTLTSGIGSLGSSENLGCARPLSWSSYRFTLGDLG*

Click here to download the sequence:
Link to NCBI Protein BLAST