Transcript Information: S_Transcript_44551.p1


Annotated TAIR IDAT5G20100.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6790153-6790494 | Forward length=113
E-Value1.1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.705689727622
Replicate 254.101797001906
Replicate 370.723883590155
Condition 2: 8 Hour
Replicate 176.956843318349
Replicate 287.347478602063
Replicate 380.814865702364
Condition 3: 24 Hour
Replicate 167.434205557921
Replicate 248.875002355949
Replicate 358.559007444922


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44551.p1 GENE.S_Transcript_44551~~S_Transcript_44551.p1 ORF type:complete len:115 (+),score=22.21,DUF4666|PF15697.1|2.9e-29 S_Transcript_44551:317-661(+)
ATGGCAGGGTTACAAAGGTCAGCAATATCATTTAGAAGGCAGGGATCCTCTGGTTTGGTGTGGGATGACAAGCTGATATCAGGAGAACTTAATCCTGAAGATGAGAAATCAGGAGAAATCATATCATCATCATCAACAGATCATAAGGCTGAATTGAGACGCACCAAATCGGACGGTGGAGGAAGGCGGAGTACCTACCGTACTGTCAAAGTCGAGCAAGCAGAGGATCCCCCCTCCCCTAGGCTCTCTGCCTGTGGTTTTTGTAGTGTTTTTGCCAAGTCTTCTTCTGACCGCCGTCGTTCTGATGTAAGAAAATTTGGTAAGCGTAACGCTAGAGCTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44551.p1 GENE.S_Transcript_44551~~S_Transcript_44551.p1 ORF type:complete len:115 (+),score=22.21,DUF4666|PF15697.1|2.9e-29 S_Transcript_44551:317-661(+)
MAGLQRSAISFRRQGSSGLVWDDKLISGELNPEDEKSGEIISSSSTDHKAELRRTKSDGGGRRSTYRTVKVEQAEDPPSPRLSACGFCSVFAKSSSDRRRSDVRKFGKRNARAR*

Click here to download the sequence:
Link to NCBI Protein BLAST