Transcript Information: S_Transcript_445556.p1


Annotated TAIR IDAT5G46100.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18694316-18695734 | Reverse length=472
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58490112604792
Replicate 20
Replicate 30.20266742949012
Condition 2: 8 Hour
Replicate 10.70303484561977
Replicate 20.24584449054645
Replicate 30
Condition 3: 24 Hour
Replicate 10.2400536647318
Replicate 20
Replicate 30.27716532313314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_445556.p1 GENE.S_Transcript_445556~~S_Transcript_445556.p1 ORF type:internal len:91 (+),score=18.08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|2.1e-21,PPR_2|PF13041.2|2.7e-07,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|3.3e-16,PPR_1|PF12854.3|1.1e-10,PPR|PF01535.16|0.68,PPR|PF01535.16|1.4e-11,PPR|PF01535.16|0.00075,PPR_3|PF13812.2|11,PPR_3|PF13812.2|9.3e-10,PPR_3|PF13812.2|0.14 S_Transcript_445556:2-271(+)
GCCAAAAACATTGATGCAGCTCTCAGCCTATTCCAAGAAATGTCTCTTGAGGGCCTTTCATCTAATGTTCGTACCTACAATACTCTCATTGATGGCTTGTGCAAGAACAATAGACTTGAATCTGCTATTCAACTTTTCGAGGAAATGAAAGCTCATGGACTACATCCAGATGTTGTCACATACGCTTCCTTGGTTGACGGTTTGTGTAAAAATGCACGAATTGAAGAGGATACGGAACTGTTTAGGGGCATGAAGAACAATGGAGTGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_445556.p1 GENE.S_Transcript_445556~~S_Transcript_445556.p1 ORF type:internal len:91 (+),score=18.08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|2.1e-21,PPR_2|PF13041.2|2.7e-07,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|3.3e-16,PPR_1|PF12854.3|1.1e-10,PPR|PF01535.16|0.68,PPR|PF01535.16|1.4e-11,PPR|PF01535.16|0.00075,PPR_3|PF13812.2|11,PPR_3|PF13812.2|9.3e-10,PPR_3|PF13812.2|0.14 S_Transcript_445556:2-271(+)
AKNIDAALSLFQEMSLEGLSSNVRTYNTLIDGLCKNNRLESAIQLFEEMKAHGLHPDVVTYASLVDGLCKNARIEEDTELFRGMKNNGVV

Click here to download the sequence:
Link to NCBI Protein BLAST