Transcript Information: S_Transcript_44563.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value8.1E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5963515182676
Replicate 22.6145093654435
Replicate 34.332700992613
Condition 2: 8 Hour
Replicate 15.0542505117529
Replicate 26.5580678964687
Replicate 34.4315691486448
Condition 3: 24 Hour
Replicate 13.8603224463628
Replicate 22.7799685717349
Replicate 32.6742708205009


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44563.p1 GENE.S_Transcript_44563~~S_Transcript_44563.p1 ORF type:complete len:481 (+),score=68.76,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|5.6e-11,PPR_2|PF13041.2|3.4e-11,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|3.5e-13,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.8e-07,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|4.6e-07,PPR_1|PF12854.3|9e-06,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.8e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|0.028,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.034,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0049,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.5e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00013 S_Transcript_44563:226-1668(+)
ATGAGGAAAGCTTATTTTCATTGTAACAAACTTACTTCAAGATGGGTTCTTTTTAGACTGTTCACTTCAAGTGAATTGTCAAATGACCAACCAGAAGCCACAATTAAACAAATTTCTAAAATCGTGATGTCTTGTCCTAAAGTAGGACTTGATGTTAGTCTTGACCATAGTGGGATTAGGGTTTCGCCTGAGATAGTTGAGAGCGTTCTCAAGAGATTTGAGAATGCGGGTATGGTTTCATTTCGGTTCTTTGAATGGGCCGCCAAGCAACGGCATTACACCCATAGTATTGAGGCCTACCATATGATGATAGGGTCGTTGGCGAAAATTAGGCAGTTTGATATCATGTGGGATCTTGTGGGGACTATGAGGAAGAAGGGGATGTTGAATGTTGAGACGTTTTGTATCATCATGAGAAGGTATGCTCGGATGCAGAAGGTGGATGAAGCGCTTTATGCGTTCAATGTTATGGAGAAACATGGTGTTACGCCGAATCTTTATGCGTTTAATGGGCTTTTGAGTGCTTTGTGCAAGTCCAAGAATGTGAGAAAGGCCCAAGAAATCTTTGGTAAGATGAAAGAACAATTTGTTCCTGACTTGAAAACTTATAGTATATTGCTCGAAGGGTGGGGAAGGGAACCAAATCTACCCAAGGCAAGAGAGATCTTTAGGCAAATGGTTGATGATGGTTGCAATCCTGATATTGTGACTTATGGTATAATGGTGGACGTTCTTTGTAAGGCAGGGAGAGTCGATGAAGCTGTTGACGTTGTTAAGAGTATGGATGCTAGTGGTTGTAGGCCAACATCTTTCATCTATAGTATTCTGGTTCATACCTATGGGGTTGAGAATCGGATTGAAGATGCCATAGATACATTCTTGGAAATGGCAAAAAATGGTGTAGTGGCTGATGTGGCAGTGTATAACGCTCTGATTAGTGCTTTTTGCAAGGTCAATAAATTCAATAACGTGTTTCGGGTTTTAAAAGAGATGGATGGTAAAGGGGTCGCACCTAATGCAAGGACCTGTAATATAATTTTGAACAGTTTGATTGGGCAGGGGTTGACTGATGAAGCTTTCAGGGTCTTCCGAAGGATGATTAAAGTATGTGATCCTGATGCAGACACATATACTTTGATGATAAAAATGTTCTTCGACAGAGATGAGTGCGAAATGGCTCTGAAGGTGTGGAAGTATATGAAGTCAAAAAGGTTTGTACCAAGCATGCACACCTATTCTGTTCTTATCAATGGGCTGTGTGAAAAGGGCAGGGTTAGTGATGCGTGTATTTATATGGAGGAGATGATTGAAAAGGGGATTCAACCATCAGTCTTGACATTTCGTAAGCTGAGGCAGTTGCTTATGAAAGAAAGTAGACAAGATGTACTTCAATTCCTTCAGGAGAAGATGAATCTTTTAGTTAAGGAGCCTCTAAACGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44563.p1 GENE.S_Transcript_44563~~S_Transcript_44563.p1 ORF type:complete len:481 (+),score=68.76,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|5.6e-11,PPR_2|PF13041.2|3.4e-11,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|3.5e-13,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.8e-07,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|4.6e-07,PPR_1|PF12854.3|9e-06,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.8e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|0.028,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.034,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0049,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.5e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00013 S_Transcript_44563:226-1668(+)
MRKAYFHCNKLTSRWVLFRLFTSSELSNDQPEATIKQISKIVMSCPKVGLDVSLDHSGIRVSPEIVESVLKRFENAGMVSFRFFEWAAKQRHYTHSIEAYHMMIGSLAKIRQFDIMWDLVGTMRKKGMLNVETFCIIMRRYARMQKVDEALYAFNVMEKHGVTPNLYAFNGLLSALCKSKNVRKAQEIFGKMKEQFVPDLKTYSILLEGWGREPNLPKAREIFRQMVDDGCNPDIVTYGIMVDVLCKAGRVDEAVDVVKSMDASGCRPTSFIYSILVHTYGVENRIEDAIDTFLEMAKNGVVADVAVYNALISAFCKVNKFNNVFRVLKEMDGKGVAPNARTCNIILNSLIGQGLTDEAFRVFRRMIKVCDPDADTYTLMIKMFFDRDECEMALKVWKYMKSKRFVPSMHTYSVLINGLCEKGRVSDACIYMEEMIEKGIQPSVLTFRKLRQLLMKESRQDVLQFLQEKMNLLVKEPLND*

Click here to download the sequence:
Link to NCBI Protein BLAST