Transcript Information: S_Transcript_445644.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22746154901864
Replicate 20.37714170183786
Replicate 30
Condition 2: 8 Hour
Replicate 10.18226829330883
Replicate 20.19121238153612
Replicate 30
Condition 3: 24 Hour
Replicate 10.18670840590251
Replicate 20.5811233737525
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_445644.p1 GENE.S_Transcript_445644~~S_Transcript_445644.p1 ORF type:complete len:117 (-),score=24.24 S_Transcript_445644:3-353(-)
ATGGCCAAAAATGATGAAGAACAGGTTTCTATTGAGGAACTGAAGACAAAGACTGTTCTATTGCTCATATCAGACCTCAACATCTCCCATGAAGAGTTGACAACCCTTGATCGTATCTGGAAAGAGAGAGAATCAAGAACAACGACTAACAAGTCGGATTATGAGATTGTTTGGCTTCCAATACTTGACAAGTCTGATTCTTGGGATGAAGCTGCCAACAAACAAAGATATATGCAGCTTGTGGCTAAGATGCCTTGGTATACTTTGCAACACCCTGAAAAAGGTAAAAGCTCAACAATCCCCAGGCTCAGTGTAATCAAACTTAGACCAACAAGGAACCAATTGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_445644.p1 GENE.S_Transcript_445644~~S_Transcript_445644.p1 ORF type:complete len:117 (-),score=24.24 S_Transcript_445644:3-353(-)
MAKNDEEQVSIEELKTKTVLLLISDLNISHEELTTLDRIWKERESRTTTNKSDYEIVWLPILDKSDSWDEAANKQRYMQLVAKMPWYTLQHPEKGKSSTIPRLSVIKLRPTRNQLP*

Click here to download the sequence:
Link to NCBI Protein BLAST