Transcript Information: S_Transcript_44623.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value9E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66532503087951
Replicate 20.47277406194675
Replicate 30.065866914584288
Condition 2: 8 Hour
Replicate 11.2185937324076
Replicate 20.79899459427595
Replicate 30.38064013580324
Condition 3: 24 Hour
Replicate 10.39008720518918
Replicate 20.32376873680496
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44623.p1 GENE.S_Transcript_44623~~S_Transcript_44623.p1 ORF type:internal len:280 (+),score=48.03,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|7.6e-16,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|1.2e-11,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|6.3e-05,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|9.8e-07,PPR_1|PF12854.3|6.4e-07,PPR_1|PF12854.3|3.3e-06,PPR|PF01535.16|93,PPR|PF01535.16|2.2,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|0.001,PPR|PF01535.16|0.001,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|3.3e-07,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.47,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|93,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|2.7e+02,MRP-S27|PF10037.5|3.8,MRP-S27|PF10037.5|7,MRP-S27|PF10037.5|0.056 S_Transcript_44623:3-839(+)
CTGTTTGAGATGGCATTGTATTTTCACAGAAAGATGATTGATAGAGGTCTTGTTCCTGTTATTATTGATTGTAATAAGATACTCAAGGCTCTTTGTAAGAGAAGCTCTTTAGAAGTTGCATCTCAGCTCTTTTATACAATGATAGAAGTTGGCCCGAGTCCTAATTTGGTGACTTTTGGCACTTTGATTGACTCATATTGCAAGGAAAAGAGCATAGATGAAGCTTTTAAGCTTTACAATTTGATGATGCAGAGGGGAATTTCTCCTGACTTGATTGTATATAGCATTCTTGTAGATGGCCTTTTGAAGAATGGAAAGTTGGAGGAAGGCTATATCCTCTTGTCCGAGGCTTTACAGAAGGGCATCAAGTTGGATGCTGTCATTTTTGGCTCAATTGTGGATTCATACGTGAGGGTCGGAGATTTGGGAAAGGTGATAGAGGTGTACAATAGAATGTGTAGGGTAGGTATCTCTCCTAGTGTAGTCACTTATGGCATTCTTATAAATGGTTTGTGTCAACATGGTCGTGTTCTTGTGGCTAGTGGAGTTTTTGGTGATCTTTTGAAGCACGGTTTGGACCCTTCTGTATCAACTTACAGTTGTCTTATTGATGGGTTCAGCAAATTGGGAAATTTGGAAGATGCATTTAGATGGTACAGAATGATGTTCCGGTGTGGTTATGTTCCTGATCTTGTCGTCTATTCAATACTTGTTAATGGGTTTAGCAAGAAAGGGCATGTAAAGAAAGCACTTCAGATATTCTTCCAGGCCAAAATGATTGGTATACAACCTAACGTACATATTTTCAATACCTTGATAGATGGCTATTGTAGATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44623.p1 GENE.S_Transcript_44623~~S_Transcript_44623.p1 ORF type:internal len:280 (+),score=48.03,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|7.6e-16,PPR_2|PF13041.2|0.0015,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|1.2e-11,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|6.3e-05,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|9.8e-07,PPR_1|PF12854.3|6.4e-07,PPR_1|PF12854.3|3.3e-06,PPR|PF01535.16|93,PPR|PF01535.16|2.2,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|0.001,PPR|PF01535.16|0.001,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|3.3e-07,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.47,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|93,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|2.7e+02,MRP-S27|PF10037.5|3.8,MRP-S27|PF10037.5|7,MRP-S27|PF10037.5|0.056 S_Transcript_44623:3-839(+)
LFEMALYFHRKMIDRGLVPVIIDCNKILKALCKRSSLEVASQLFYTMIEVGPSPNLVTFGTLIDSYCKEKSIDEAFKLYNLMMQRGISPDLIVYSILVDGLLKNGKLEEGYILLSEALQKGIKLDAVIFGSIVDSYVRVGDLGKVIEVYNRMCRVGISPSVVTYGILINGLCQHGRVLVASGVFGDLLKHGLDPSVSTYSCLIDGFSKLGNLEDAFRWYRMMFRCGYVPDLVVYSILVNGFSKKGHVKKALQIFFQAKMIGIQPNVHIFNTLIDGYCRL

Click here to download the sequence:
Link to NCBI Protein BLAST