Transcript Information: S_Transcript_44625.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7156123709368
Replicate 23.795057095899
Replicate 33.6831703257336
Condition 2: 8 Hour
Replicate 14.7251593705601
Replicate 25.5440441235474
Replicate 35.1269895842885
Condition 3: 24 Hour
Replicate 13.5665115903011
Replicate 23.5350260038909
Replicate 34.1914184579931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_44625.p1 GENE.S_Transcript_44625~~S_Transcript_44625.p1 ORF type:complete len:686 (+),score=63.16,PPR_2|PF13041.2|8.6e+02,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|0.0032,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.97,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|37,PPR|PF01535.16|0.003,PPR|PF01535.16|14,PPR|PF01535.16|0.069,PPR|PF01535.16|7.6,PPR|PF01535.16|1.2,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|31,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|6.5,PPR_1|PF12854.3|0.0046 S_Transcript_44625:297-2354(+)
ATGCTCTCTAACCCTAAGAAACCTCCTGACCTTTTCCCCGCCGTCTCCTCCCCCCCTTCCCCCTCCCTTTTGATTCGAAGGTGTTTGCAACCCTTGATCCTCCAGCAATGTCTGGTTTTGTATGATTTTGCTGTTCTCGTGGGTAATTTTGACTATTTTGGAGCGGGTTGGTTGGCCTTGTCTCTAGAATCTTCCCACCTCCTCTGTTGGGGTGAAGAGCTAGGGATGATTCTTGAGATCCAGATTAAATTGCTTTTTCTTGTTCTCCCTTCTCTGATCATCCTCTTTAGAGGTTCTGCTGTATATCATGATTATATTGCTTATTTTTCTCTGGTTTTTATTGGCTCGTTTCTTGCGCATGGACTCATATTATCTCTTGACTCTTCTCTTAAGCTACTACTGATGGTATTTTCTCTTTCTCTGTCTGTTTGGGAGTCTATTTCTGGAAGCTCCTGGACAAGGTGTGGCATCTCTGTGGATTTTACTCTCAATTTTGCCAACTTGGTGTCTTCCTCCATGTCCTGGCTGAGGATTCTCTATCATTACTTTGAGTATTGGTATGTTTATTTATTTTTATTGTTTTATTTTCTGCCATTGATTCTCGAGCTAACCTATCTTGCGCATATATTGCCTTTTCACCACTTGTTTAGCCCCGCCCACCAGATGTTCGACAAAATGCTTGAAAGGTTCTGGGACCTTGATCCTTTTAGTGCCCTTTCTGATGATTTAAGGACTTATGGGTCTAACCCCAAAACAGTTTATAGCTTCCTAGTTGCTGGGTTTTTTAGGAATAGTAGGTTTGATAAGGGCATTGATACTTTCTTGAGGATGTCCTGTACTGGGATTGACATTGCTCCTTATGCCTTGAGAATTATGGTGGATTCATTGGTTGTTTCTCATGACATTGATGGGATTATGAGTATATTTGATGAATTGTGGGATCAGTATAGTAAAAAGTTGGTGCAGCATTTCAATATTTATGAGTCTGTTATGATGAGTTTTGTTGGTAATCAGCTGTTTGAGATGGCATTGTATTCTCACAGAAAGAAGATTGATAGAGGAAATTTGAAAGATGCATTTAGATGGTACAAAATGATGTTCCAGTGTGGTTATTTTCCTGAACTTGTCATTTATTCGATACTTGTTAATGGGTCGAGCAAGAAAGGGCATGTAAAGGAAGCACTTCAGATGTTCTTCCAGGTAAAAATGATTGGTATACTCCCTAATGTACATTTTTTCAATACTTTGATAGATGGCTATTGTTTTTTTTTTTTGGTGCTGATAGATGGCTATTGTAGATTGAATCAAACGAAGGACATGATTAAGGTGTACATTTTTATGCAAATACATAACATAATATCAGATGCAATAACTCACAGTTTGTTTTTTAAAGCACTGATTGCGCAGGGGAAACTCAACATGGCATTGGCGCTCTTCGTTCAATTGATTAAAAAAGGTTTGTCTTTGGATTCCATTGCATATTGCATACTAATTGACACCTTTTGCAGGCAAAACAAACTCGAATCTTTATTATGGCTTTTCCAGCTAGTGCTAAGGCATCAGCTGAAACTTGACATTTCCCTGTACAATGTTCTTCTTAAAATGGGAAATGCCCATTGCCTCTTGTATGCCACTGCCATGTTGTGCTTACAAGCAATGACAGCTGCTAATTTATCTTGTCACAGTTTTCTGCATCAACTTTTCATGATTTGTTTTTTAGCATCTAGAGACTTTTGCTGGGGCAATCTTGTAGTTGTTCTTACTCGGTGCTATTCAGGCCATATTATGCAGGAACTTCTTTTTGTTGAAAATGGAGACTATGGGTTTTATAAACTCCATTTTTTTATTGGATTGTTTCTACTCATGCTTTTCTCAAAGGTAGTATGTAAAATTCAATCTCTAACTCTTGTTGGGATCTATTTTATTAATGGTTCCTATGCACATACTATCCAGTTCTCTTTCTTCACTGAGGATTTAAGGTTGTCATACTCTCCCTTTCGTATGCCTTCTAACTTTGTATTAATTTGGCTGTATTTTTCTTCGATGCTTTGCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_44625.p1 GENE.S_Transcript_44625~~S_Transcript_44625.p1 ORF type:complete len:686 (+),score=63.16,PPR_2|PF13041.2|8.6e+02,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|0.0032,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.97,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|37,PPR|PF01535.16|0.003,PPR|PF01535.16|14,PPR|PF01535.16|0.069,PPR|PF01535.16|7.6,PPR|PF01535.16|1.2,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|31,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|6.5,PPR_1|PF12854.3|0.0046 S_Transcript_44625:297-2354(+)
MLSNPKKPPDLFPAVSSPPSPSLLIRRCLQPLILQQCLVLYDFAVLVGNFDYFGAGWLALSLESSHLLCWGEELGMILEIQIKLLFLVLPSLIILFRGSAVYHDYIAYFSLVFIGSFLAHGLILSLDSSLKLLLMVFSLSLSVWESISGSSWTRCGISVDFTLNFANLVSSSMSWLRILYHYFEYWYVYLFLLFYFLPLILELTYLAHILPFHHLFSPAHQMFDKMLERFWDLDPFSALSDDLRTYGSNPKTVYSFLVAGFFRNSRFDKGIDTFLRMSCTGIDIAPYALRIMVDSLVVSHDIDGIMSIFDELWDQYSKKLVQHFNIYESVMMSFVGNQLFEMALYSHRKKIDRGNLKDAFRWYKMMFQCGYFPELVIYSILVNGSSKKGHVKEALQMFFQVKMIGILPNVHFFNTLIDGYCFFFLVLIDGYCRLNQTKDMIKVYIFMQIHNIISDAITHSLFFKALIAQGKLNMALALFVQLIKKGLSLDSIAYCILIDTFCRQNKLESLLWLFQLVLRHQLKLDISLYNVLLKMGNAHCLLYATAMLCLQAMTAANLSCHSFLHQLFMICFLASRDFCWGNLVVVLTRCYSGHIMQELLFVENGDYGFYKLHFFIGLFLLMLFSKVVCKIQSLTLVGIYFINGSYAHTIQFSFFTEDLRLSYSPFRMPSNFVLIWLYFSSMLCR*

Click here to download the sequence:
Link to NCBI Protein BLAST