Transcript Information: S_Transcript_446348.p1


Annotated TAIR IDAT5G61400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24681550-24683514 | Forward length=654
E-Value9E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17937227282532
Replicate 30.44982283130733
Condition 2: 8 Hour
Replicate 11.5603944134488
Replicate 20
Replicate 30.17329957402424
Condition 3: 24 Hour
Replicate 10.17760067878532
Replicate 20.18425863070201
Replicate 31.0252863579316


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_446348.p1 GENE.S_Transcript_446348~~S_Transcript_446348.p1 ORF type:internal len:123 (+),score=25.85,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|4.4e-11,PPR|PF01535.16|0.024,PPR|PF01535.16|0.14,PPR|PF01535.16|1.7e-07,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.3e-10,PPR_3|PF13812.2|53,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.0002 S_Transcript_446348:3-368(+)
TTACTTTACAAGGACTTGAATCGAGTAGATATGTCGAAATTTAGCAACAATGTGTTTGGGACTTTGATAGTTGCATTATCCGAAATGGGTCTTATGGATGAAGCCGTTTGGGTTTATCGAAAGATTGGTGATTTGCCTGCTATGCAGGCTTGTAATGCACTTTTGAATGGGTTGATTAAGGTTGGTAGGATTGGTTCAATGTGGGATTTTTATCATGGTATGGTTGCTCAAGGAATGTTGCCTAATGTGTTCACATATGGAGTATTAATTGATGCCTGTTGTGAGGAGGGGGACATTGAGAAAGCCGGGAAGTTGTTCACTGAAATGGTTGGGAATAAGATTGAGCCATCGGTTGTTATCTTGACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_446348.p1 GENE.S_Transcript_446348~~S_Transcript_446348.p1 ORF type:internal len:123 (+),score=25.85,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|4.4e-11,PPR|PF01535.16|0.024,PPR|PF01535.16|0.14,PPR|PF01535.16|1.7e-07,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.3e-10,PPR_3|PF13812.2|53,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.0002 S_Transcript_446348:3-368(+)
LLYKDLNRVDMSKFSNNVFGTLIVALSEMGLMDEAVWVYRKIGDLPAMQACNALLNGLIKVGRIGSMWDFYHGMVAQGMLPNVFTYGVLIDACCEEGDIEKAGKLFTEMVGNKIEPSVVILT

Click here to download the sequence:
Link to NCBI Protein BLAST